RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 SNX14Q9Y5W7 946 aa25.4■■□□□ 1.66
SSPN-204ENST00000535504 ADCK5Q3MIX3 580 aa25.39■■□□□ 1.66
SSPN-204ENST00000535504 ZNF467Q7Z7K2 595 aaPredicted RBP25.39■■□□□ 1.66
SSPN-204ENST00000535504 SGMS1Q86VZ5 419 aa25.39■■□□□ 1.66
SSPN-204ENST00000535504 MCF2L2Q86YR7 1114 aa25.39■■□□□ 1.66
SSPN-204ENST00000535504 AMNQ9BXJ7 453 aa25.39■■□□□ 1.66
SSPN-204ENST00000535504 SENP2Q9HC62 589 aa25.39■■□□□ 1.66
SSPN-204ENST00000535504 ADD3Q9UEY8 706 aaKnown RBP25.39■■□□□ 1.66
SSPN-204ENST00000535504 SEC63Q9UGP8 760 aaKnown RBP25.39■■□□□ 1.66
SSPN-204ENST00000535504 PLXNA1Q9UIW2 1896 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 ASB14A6NK59 587 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 B4DLN1 442 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 ZBTB5O15062 677 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 MRPL12P52815 198 aaKnown RBP25.38■■□□□ 1.65
SSPN-204ENST00000535504 QRICH1Q2TAL8 776 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 RNF207Q6ZRF8 634 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 HOMER1Q86YM7 354 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 USP26Q9BXU7 913 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 MAF1Q9H063 256 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 JMJD4Q9H9V9 463 aa25.38■■□□□ 1.65
SSPN-204ENST00000535504 SYNGAP1Q96PV0 1343 aa25.37■■□□□ 1.65
SSPN-204ENST00000535504 MYH6P13533 1939 aa25.37■■□□□ 1.65
SSPN-204ENST00000535504 HTTP42858 3142 aa25.37■■□□□ 1.65
SSPN-204ENST00000535504 DNAJC25-GNG10A0A024R161 153 aa25.37■■□□□ 1.65
SSPN-204ENST00000535504 CASTP20810 708 aaKnown RBP25.37■■□□□ 1.65
SSPN-204ENST00000535504 MUM1L1Q5H9M0 696 aa25.37■■□□□ 1.65
SSPN-204ENST00000535504 MICU3Q86XE3 530 aa25.37■■□□□ 1.65
SSPN-204ENST00000535504 MYL10Q9BUA6 226 aa25.37■■□□□ 1.65
SSPN-204ENST00000535504 RBM28Q9NW13 759 aaKnown RBP25.37■■□□□ 1.65
SSPN-204ENST00000535504 CCND3P30281 292 aaPredicted RBP25.36■■□□□ 1.65
SSPN-204ENST00000535504 EXOSC10Q01780 885 aaKnown RBP25.36■■□□□ 1.65
SSPN-204ENST00000535504 RRP36Q96EU6 259 aaKnown RBP25.36■■□□□ 1.65
SSPN-204ENST00000535504 GPHNQ9NQX3 736 aaPredicted RBP25.36■■□□□ 1.65
SSPN-204ENST00000535504 CYP39A1Q9NYL5 469 aa25.36■■□□□ 1.65
SSPN-204ENST00000535504 CYP46A1Q9Y6A2 500 aa25.36■■□□□ 1.65
SSPN-204ENST00000535504 ZBTB43O43298 467 aa25.35■■□□□ 1.65
SSPN-204ENST00000535504 CYBAP13498 195 aa25.35■■□□□ 1.65
SSPN-204ENST00000535504 SMARCA1P28370 1054 aa25.35■■□□□ 1.65
SSPN-204ENST00000535504 TCEANC2Q96MN5 208 aa25.35■■□□□ 1.65
SSPN-204ENST00000535504 RIOX1Q9H6W3 641 aa25.35■■□□□ 1.65
SSPN-204ENST00000535504 DDX20Q9UHI6 824 aaKnown RBP25.35■■□□□ 1.65
SSPN-204ENST00000535504 FARP2O94887 1054 aaPredicted RBP25.34■■□□□ 1.65
SSPN-204ENST00000535504 CALML3P27482 149 aa25.34■■□□□ 1.65
SSPN-204ENST00000535504 Q6ZUG5 572 aa25.34■■□□□ 1.65
SSPN-204ENST00000535504 ANKLE1Q8NAG6 615 aa25.34■■□□□ 1.65
SSPN-204ENST00000535504 FANCBQ8NB91 859 aa25.34■■□□□ 1.65
SSPN-204ENST00000535504 SPZ1Q9BXG8 430 aa25.34■■□□□ 1.65
SSPN-204ENST00000535504 PNMA6FA0A0J9YX94 578 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 KLF18A0A0U1RQI7 1052 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 CCDC196A0A1B0GTZ2 297 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 NFIBO00712 420 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 SEPT4O43236 478 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 RPS6KB1P23443 525 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 BAATQ14032 418 aaPredicted RBP25.33■■□□□ 1.65
SSPN-204ENST00000535504 RTN1Q16799 776 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 MAMDC4Q6UXC1 1216 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 CCDC144CPQ8IYA2 1237 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 FAM133AQ8N9E0 248 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 RGS22Q8NE09 1264 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 PIGSQ96S52 555 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 ABHD16BQ9H3Z7 469 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 ZHX1Q9UKY1 873 aaPredicted RBP25.33■■□□□ 1.65
SSPN-204ENST00000535504 PCDHA1Q9Y5I3 950 aa25.33■■□□□ 1.65
SSPN-204ENST00000535504 LOC102724159A0A0B4J2E5 919 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 GOLGA8AA7E2F4 631 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 GOLGA8BA8MQT2 603 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 AKR1A1P14550 325 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 RXRAP19793 462 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 RCAN1P53805 252 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 PPP2R5BQ15173 497 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 PWP2Q15269 919 aaKnown RBP25.32■■□□□ 1.64
SSPN-204ENST00000535504 APOA5Q6Q788 366 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 ARMCX2Q7L311 632 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 CRISPLD2Q9H0B8 497 aa25.32■■□□□ 1.64
SSPN-204ENST00000535504 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.32■■□□□ 1.64
SSPN-204ENST00000535504 RARBP10826 455 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 TAL1P17542 331 aaPredicted RBP25.31■■□□□ 1.64
SSPN-204ENST00000535504 CNTN2Q02246 1040 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 RUFY3Q7L099 469 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 SAMD3Q8N6K7 520 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 CLEC4DQ8WXI8 215 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 PIBF1Q8WXW3 757 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 MTMR8Q96EF0 704 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 HTATIP2Q9BUP3 242 aa25.31■■□□□ 1.64
SSPN-204ENST00000535504 ANAPC15P60006 121 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 RPS6P62753 249 aaKnown RBP25.3■■□□□ 1.64
SSPN-204ENST00000535504 PRAMEF19Q5SWL8 479 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 RAB11FIP4Q86YS3 637 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 ARRDC4Q8NCT1 418 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 DNERQ8NFT8 737 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 BRF1Q92994 677 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 SHISA4Q96DD7 197 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 TM6SF1Q9BZW5 370 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 OGDHLQ9ULD0 1010 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 FAM184BQ9ULE4 1060 aa25.3■■□□□ 1.64
SSPN-204ENST00000535504 METAP2P50579 478 aaKnown RBP eCLIP25.29■■□□□ 1.64
SSPN-204ENST00000535504 NECAB2Q7Z6G3 386 aa25.29■■□□□ 1.64
SSPN-204ENST00000535504 MAP3K20Q9NYL2 800 aaKnown RBP25.29■■□□□ 1.64
SSPN-204ENST00000535504 CFBP00751 764 aa25.28■■□□□ 1.64
SSPN-204ENST00000535504 IGHA2P01877 340 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms