RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 PDE4DQ08499 809 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 SMIM5Q71RC9 77 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 ANKRD18AQ8IVF6 992 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 BLIDQ8IZY5 108 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 SPATA4Q8NEY3 305 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 CAPS2Q9BXY5 557 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 IFIH1Q9BYX4 1025 aaKnown RBP14.95□□□□□ -0.02
HDAC4-214ENST00000535493 SLC39A2Q9NP94 309 aa14.95□□□□□ -0.02
HDAC4-214ENST00000535493 RBM28Q9NW13 759 aaKnown RBP14.95□□□□□ -0.02
HDAC4-214ENST00000535493 DNM2P50570 870 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 NAP1L1P55209 391 aaKnown RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 TRADDQ15628 312 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 ENOX2Q16206 610 aaKnown RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 MEA1Q16626 185 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 PFKFB3Q16875 520 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 ZNF34Q8IZ26 560 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 CARD10Q9BWT7 1032 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 ARHGAP20Q9P2F6 1191 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 PLCG1P19174 1290 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 CKAP4Q07065 602 aaKnown RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 PTPROQ16827 1216 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 HEATR3Q7Z4Q2 680 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 AENQ8WTP8 325 aaKnown RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 UIMC1Q96RL1 719 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 MMRN2Q9H8L6 949 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 FAM184BQ9ULE4 1060 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 SNX12Q9UMY4 172 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 CCDC194A0A1B0GVG4 234 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 EEF1GP26641 437 aaKnown RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 RCAN1P53805 252 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 ASIC1P78348 528 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 SPA17Q15506 151 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 TTMPQ5BVD1 217 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 MIIPQ5JXC2 388 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 C3orf67Q6ZVT6 689 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-214ENST00000535493 IFT81Q8WYA0 676 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 DEF6Q9H4E7 631 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 KANSL2Q9H9L4 492 aa14.94□□□□□ -0.02
HDAC4-214ENST00000535493 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 UBR2Q8IWV8 1755 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 A0A1W2PQC6 194 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 FAM170AA1A519 330 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 TARSL2A2RTX5 802 aaKnown RBP14.93□□□□□ -0.02
HDAC4-214ENST00000535493 LONP1P36776 959 aaKnown RBP14.93□□□□□ -0.02
HDAC4-214ENST00000535493 EIF4A3P38919 411 aaKnown RBP14.93□□□□□ -0.02
HDAC4-214ENST00000535493 APBA1Q02410 837 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 TXNRD1Q16881 649 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 GIMAP8Q8ND71 665 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-214ENST00000535493 DYNLL2Q96FJ2 89 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 ANAPC4Q9UJX5 808 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 SLIT2O94813 1529 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 EBAG9O00559 213 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 FAM153BP0C7A2 387 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 ZBED6P86452 979 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 FAM153CQ494X1 144 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 THAP9Q9H5L6 903 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 RBM12Q9NTZ6 932 aaKnown RBP14.93□□□□□ -0.02
HDAC4-214ENST00000535493 TFCP2L1Q9NZI6 479 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 FAM153AQ9UHL3 310 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-214ENST00000535493 PCDHA13Q9Y5I0 950 aa14.93□□□□□ -0.02
HDAC4-214ENST00000535493 USP17L3A6NCW0 530 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 USP17L4A6NCW7 530 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 AKR1B10O60218 316 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 ERLIN2O94905 339 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 USP17L8P0C7I0 530 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 MCM3P25205 808 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 GUCY2FP51841 1108 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 VAV2P52735 878 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 IRX3P78415 501 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-214ENST00000535493 RASSF7Q02833 373 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 GFPT1Q06210 699 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-214ENST00000535493 PPP2R5BQ15173 497 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 LETM2Q2VYF4 491 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 CCDC181Q5TID7 509 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 RRAGAQ7L523 313 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 DYMQ7RTS9 669 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 USP17L1Q7RTZ2 530 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 EFCAB13Q8IY85 973 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 GPATCH11Q8N954 259 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 OSBPL9Q96SU4 736 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 FAM107BQ9H098 131 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 NIP7Q9Y221 180 aaKnown RBP eCLIP14.92□□□□□ -0.02
HDAC4-214ENST00000535493 GRIN2DO15399 1336 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 PRDX5P30044 214 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 TECP42680 631 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 SLC35G1Q2M3R5 365 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 RCSD1Q6JBY9 416 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 GLIS3Q8NEA6 775 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 P2RX5Q93086 422 aa14.92□□□□□ -0.02
HDAC4-214ENST00000535493 COL5A2P05997 1499 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-214ENST00000535493 RHOBTB3O94955 611 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 CARSP49589 748 aaKnown RBP14.91□□□□□ -0.02
HDAC4-214ENST00000535493 KIF11P52732 1056 aa14.91□□□□□ -0.02
HDAC4-214ENST00000535493 CCDC152Q4G0S7 254 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms