RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 SPC25Q9HBM1 224 aa22.16■■□□□ 1.14
NDUFS3-213ENST00000534716 PNMA2Q9UL42 364 aa22.16■■□□□ 1.14
NDUFS3-213ENST00000534716 MTMR7Q9Y216 660 aa22.16■■□□□ 1.14
NDUFS3-213ENST00000534716 SUPT16HQ9Y5B9 1047 aaKnown RBP22.16■■□□□ 1.14
NDUFS3-213ENST00000534716 LTBP2Q14767 1821 aa22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 NEDD4P46934 1319 aa22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 SLC16A2P36021 539 aa22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 ZNF543Q08ER8 600 aa22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 SH3RF1Q7Z6J0 888 aa22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 PCSK9Q8NBP7 692 aaKnown RBP22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 MORC4Q8TE76 937 aa22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 PRDM5Q9NQX1 630 aaPredicted RBP22.15■■□□□ 1.14
NDUFS3-213ENST00000534716 LOC102724159A0A0B4J2E5 919 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 MYADML2A6NDP7 307 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 KIAA0355O15063 1070 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 CLTBP09497 229 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 PWP2Q15269 919 aaKnown RBP22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 CCDC178Q5BJE1 867 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 ANKS1AQ92625 1134 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 BADQ92934 168 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 GPCPD1Q9NPB8 672 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 STARD7Q9NQZ5 370 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 COL6A3P12111 3177 aa22.14■■□□□ 1.13
NDUFS3-213ENST00000534716 FRMPD2Q68DX3 1309 aaPredicted RBP22.13■■□□□ 1.13
NDUFS3-213ENST00000534716 CTAGE5O15320 804 aa22.13■■□□□ 1.13
NDUFS3-213ENST00000534716 C6orf222P0C671 652 aaPredicted RBP22.13■■□□□ 1.13
NDUFS3-213ENST00000534716 GPATCH4Q5T3I0 446 aaKnown RBP22.13■■□□□ 1.13
NDUFS3-213ENST00000534716 CTNNA3Q9UI47 895 aa22.13■■□□□ 1.13
NDUFS3-213ENST00000534716 ASGR1P07306 291 aa22.12■■□□□ 1.13
NDUFS3-213ENST00000534716 CDK7P50613 346 aa22.12■■□□□ 1.13
NDUFS3-213ENST00000534716 TNFAIP2Q03169 654 aa22.12■■□□□ 1.13
NDUFS3-213ENST00000534716 FAAP100Q0VG06 881 aa22.12■■□□□ 1.13
NDUFS3-213ENST00000534716 DEFB123Q8N688 67 aa22.12■■□□□ 1.13
NDUFS3-213ENST00000534716 GLT1D1Q96MS3 346 aa22.12■■□□□ 1.13
NDUFS3-213ENST00000534716 GNEQ9Y223 722 aaKnown RBP22.12■■□□□ 1.13
NDUFS3-213ENST00000534716 WDR19Q8NEZ3 1342 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 PQBP1O60828 265 aaKnown RBP22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 ITGB8P26012 769 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 PDE4AP27815 886 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 IRX5P78411 483 aaPredicted RBP22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 IMMTQ16891 758 aaKnown RBP22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 GNASQ5JWF2 1037 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 IQSEC1Q6DN90 963 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 FAM109BQ6ICB4 259 aaPredicted RBP22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 TAPT1Q6NXT6 567 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 NSMFQ6X4W1 530 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 IQCA1Q86XH1 822 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 Q9Y3F1 56 aa22.11■■□□□ 1.13
NDUFS3-213ENST00000534716 MROH7Q68CQ1 1323 aa22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 DCDC2CA8MYV0 355 aa22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 KDM4AO75164 1064 aa22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 BAATQ14032 418 aaPredicted RBP22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 CLEC4DQ8WXI8 215 aa22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 MAF1Q9H063 256 aa22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 VTA1Q9NP79 307 aa22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 ADD3Q9UEY8 706 aaKnown RBP22.1■■□□□ 1.13
NDUFS3-213ENST00000534716 LAMA4Q16363 1823 aa22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 NFIBO00712 420 aa22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 GSPT1P15170 499 aaKnown RBP22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 SHHQ15465 462 aa22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 TTC22Q5TAA0 569 aa22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 ZSCAN10Q96SZ4 725 aaPredicted RBP22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 ZKSCAN3Q9BRR0 538 aa22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 TMEM39AQ9NV64 488 aa22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 MTMR10Q9NXD2 777 aa22.09■■□□□ 1.13
NDUFS3-213ENST00000534716 A0A0U1RQG5 324 aaPredicted RBP22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 SMPD1P17405 629 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 Q7L0L9 218 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 TLK2Q86UE8 772 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 PNMA1Q8ND90 353 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 PURBQ96QR8 312 aaKnown RBP22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 KRT23Q9C075 422 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 CNNM2Q9H8M5 875 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 ZSWIM5Q9P217 1185 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 TBX21Q9UL17 535 aa22.08■■□□□ 1.13
NDUFS3-213ENST00000534716 LRRC37A2A6NM11 1700 aa22.08■■□□□ 1.12
NDUFS3-213ENST00000534716 RAD50Q92878 1312 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 ARVCFO00192 962 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 CABYRO75952 493 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 RAG1P15918 1043 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 ALDH5A1P51649 535 aaPredicted RBP22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 C9orf50Q5SZB4 431 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 ENAHQ8N8S7 591 aaPredicted RBP22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 SLC43A3Q8NBI5 491 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 RGS22Q8NE09 1264 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 IL25Q9H293 177 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 KAT14Q9H8E8 782 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 PDGFCQ9NRA1 345 aa22.07■■□□□ 1.12
NDUFS3-213ENST00000534716 RBM47A0AV96 593 aaKnown RBP22.06■■□□□ 1.12
NDUFS3-213ENST00000534716 B4E1Z4 1266 aa22.06■■□□□ 1.12
NDUFS3-213ENST00000534716 FBXO16Q8IX29 292 aaPredicted RBP22.06■■□□□ 1.12
NDUFS3-213ENST00000534716 SEZ6LQ9BYH1 1024 aa22.06■■□□□ 1.12
NDUFS3-213ENST00000534716 AP5M1Q9H0R1 490 aa22.06■■□□□ 1.12
NDUFS3-213ENST00000534716 DDX49Q9Y6V7 483 aaKnown RBP22.06■■□□□ 1.12
NDUFS3-213ENST00000534716 MCM3APO60318 1980 aa22.06■■□□□ 1.12
NDUFS3-213ENST00000534716 PTPDC1A2A3K4 754 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 TIMP1P01033 207 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 GOLGA8HP0CJ92 632 aa22.05■■□□□ 1.12
NDUFS3-213ENST00000534716 EDNRBP24530 442 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms