RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 CTAGE5O15320 804 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 TLR3O15455 904 aaKnown RBP14.83□□□□□ -0.04
USF1-211ENST00000534633 NEFLP07196 543 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 ALAS1P13196 640 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 TNFAIP2Q03169 654 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 PPIGQ13427 754 aaKnown RBP eCLIP14.83□□□□□ -0.043e-7■■■■□ 19.5
USF1-211ENST00000534633 CCDC174Q6PII3 467 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 CCDC129Q6ZRS4 1044 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 KCTD1Q719H9 257 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 TRERF1Q96PN7 1200 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 IL17RBQ9NRM6 502 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 ANAPC4Q9UJX5 808 aa14.83□□□□□ -0.04
USF1-211ENST00000534633 VCANP13611 3396 aa14.82□□□□□ -0.04
USF1-211ENST00000534633 FOSL2P15408 326 aa14.82□□□□□ -0.04
USF1-211ENST00000534633 NOVP48745 357 aa14.82□□□□□ -0.04
USF1-211ENST00000534633 CTDSPL2Q05D32 466 aa14.82□□□□□ -0.04
USF1-211ENST00000534633 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
USF1-211ENST00000534633 FAM126BQ8IXS8 530 aa14.82□□□□□ -0.04
USF1-211ENST00000534633 EVI5LQ96CN4 794 aa14.82□□□□□ -0.04
USF1-211ENST00000534633 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.82□□□□□ -0.04
USF1-211ENST00000534633 PRR12Q9ULL5 1215 aa14.82□□□□□ -0.04
USF1-211ENST00000534633 MYO9BQ13459 2157 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.81□□□□□ -0.04
USF1-211ENST00000534633 ORC4O43929 436 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 RANBP6O60518 1105 aaKnown RBP14.81□□□□□ -0.04
USF1-211ENST00000534633 NMT2O60551 498 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 CABYRO75952 493 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 DNAJB2P25686 324 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 VPS53Q5VIR6 699 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 ERICH6BQ5W0A0 696 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 TLK2Q86UE8 772 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 TMEM199Q8N511 208 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 CHMP4CQ96CF2 233 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 CCDC136Q96JN2 1154 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 INCENPQ9NQS7 918 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 HELLSQ9NRZ9 838 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 CYP39A1Q9NYL5 469 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 GNEQ9Y223 722 aaKnown RBP14.81□□□□□ -0.04
USF1-211ENST00000534633 ASTN1O14525 1302 aa14.81□□□□□ -0.04
USF1-211ENST00000534633 CD4P01730 458 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 FGRP09769 529 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 BEX3Q00994 111 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 ALX1Q15699 326 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
USF1-211ENST00000534633 MUM1L1Q5H9M0 696 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 TMEM240Q5SV17 173 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 IQSEC1Q6DN90 963 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 PSRC1Q6PGN9 363 aaPredicted RBP14.8□□□□□ -0.04
USF1-211ENST00000534633 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
USF1-211ENST00000534633 RASGRP2Q7LDG7 609 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 TICAM2Q86XR7 235 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 SLC43A3Q8NBI5 491 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 DCAF4Q8WV16 495 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 SEZ6LQ9BYH1 1024 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 AP5M1Q9H0R1 490 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 CCPG1Q9ULG6 757 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 Q9Y3F1 56 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 LAMA4Q16363 1823 aa14.8□□□□□ -0.04
USF1-211ENST00000534633 ZEB2O60315 1214 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 ICAM1P05362 532 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 GSPT1P15170 499 aaKnown RBP14.79□□□□□ -0.04
USF1-211ENST00000534633 CSF2RAP15509 400 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 SNAP25P60880 206 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 CCDC96Q2M329 555 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 CXCL17Q6UXB2 119 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 BTNL9Q6UXG8 535 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 C16orf59Q7L2K0 433 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 MORC4Q8TE76 937 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 PPP1R12CQ9BZL4 782 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 RANBP17Q9H2T7 1088 aaKnown RBP14.79□□□□□ -0.04
USF1-211ENST00000534633 VTA1Q9NP79 307 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 PPP4R2Q9NY27 417 aa14.79□□□□□ -0.04
USF1-211ENST00000534633 MYH6P13533 1939 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 ZMYM6O95789 1325 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 LOC102724159A0A0B4J2E5 919 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 TOP1P11387 765 aaKnown RBP14.78□□□□□ -0.04
USF1-211ENST00000534633 SMPD1P17405 629 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 ITGA7Q13683 1181 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 GRIN2CQ14957 1233 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 PWP2Q15269 919 aaKnown RBP14.78□□□□□ -0.04
USF1-211ENST00000534633 TAPT1Q6NXT6 567 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 NSMFQ6X4W1 530 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 TIFAQ96CG3 184 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 ZNF576Q9H609 170 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 TCP11L1Q9NUJ3 509 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 ADD3Q9UEY8 706 aaKnown RBP14.78□□□□□ -0.04
USF1-211ENST00000534633 MTMR7Q9Y216 660 aa14.78□□□□□ -0.04
USF1-211ENST00000534633 DYNC1LI2O43237 492 aaPredicted RBP14.77□□□□□ -0.05
USF1-211ENST00000534633 FGAP02671 866 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 CYP2C18P33260 490 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 MCMDC2Q4G0Z9 681 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 TTC22Q5TAA0 569 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 SYDE2Q5VT97 1194 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 ZNF365Q70YC5 407 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 EEPD1Q7L9B9 569 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 FBXO16Q8IX29 292 aaPredicted RBP14.77□□□□□ -0.05
USF1-211ENST00000534633 TMEM47Q9BQJ4 181 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 IL23AQ9NPF7 189 aa14.77□□□□□ -0.05
USF1-211ENST00000534633 PDGFCQ9NRA1 345 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms