RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 ZSCAN10Q96SZ4 725 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-210ENST00000534405 CDCA7Q9BWT1 371 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-210ENST00000534405 BATF3Q9NR55 127 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 DUOX1Q9NRD9 1551 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.36■■□□□ 1.01
SMPD1-210ENST00000534405 A0A087X0B3 334 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 PDHBP11177 359 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 SLC8A1P32418 973 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 TRAF1Q13077 416 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 MORC3Q14149 939 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 SMIM5Q71RC9 77 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 TRAPPC11Q7Z392 1133 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 GDAP1L1Q96MZ0 367 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 OPA1O60313 960 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 KLRK1P26718 216 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 NAA35Q5VZE5 725 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 CYB5D1Q6P9G0 228 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 FAM84BQ96KN1 310 aaPredicted RBP21.35■■□□□ 1.01
SMPD1-210ENST00000534405 ACTR5Q9H9F9 607 aaPredicted RBP21.35■■□□□ 1.01
SMPD1-210ENST00000534405 KIF9Q9HAQ2 790 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 MINPP1Q9UNW1 487 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 KCNQ4P56696 695 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 RPGRIP1Q96KN7 1286 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 PHF20Q9BVI0 1012 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 NFE2L3Q9Y4A8 694 aa21.35■■□□□ 1.01
SMPD1-210ENST00000534405 IBSPP21815 317 aaPredicted RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 PDCLQ13371 301 aa21.34■■□□□ 1.01
SMPD1-210ENST00000534405 UBE4AQ14139 1066 aa21.34■■□□□ 1.01
SMPD1-210ENST00000534405 RBBP5Q15291 538 aaKnown RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 AENQ8WTP8 325 aaKnown RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 CELF1Q92879 486 aaKnown RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 HOOK1Q9UJC3 728 aaKnown RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 V9GY48 417 aaPredicted RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 SNUPNO95149 360 aaKnown RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 IPO7O95373 1038 aaKnown RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 FECHP22830 423 aa21.34■■□□□ 1.01
SMPD1-210ENST00000534405 RNF187Q5TA31 235 aaPredicted RBP21.34■■□□□ 1.01
SMPD1-210ENST00000534405 FUKQ8N0W3 1084 aa21.34■■□□□ 1.01
SMPD1-210ENST00000534405 EPN3Q9H201 632 aa21.34■■□□□ 1.01
SMPD1-210ENST00000534405 FAM184BQ9ULE4 1060 aa21.34■■□□□ 1.01
SMPD1-210ENST00000534405 SKAP2O75563 359 aaPredicted RBP21.33■■□□□ 1.01
SMPD1-210ENST00000534405 TROAPQ12815 778 aa21.33■■□□□ 1.01
SMPD1-210ENST00000534405 SF3B3Q15393 1217 aaKnown RBP21.33■■□□□ 1.01
SMPD1-210ENST00000534405 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1.01
SMPD1-210ENST00000534405 EPSTI1Q96J88 318 aa21.33■■□□□ 1.01
SMPD1-210ENST00000534405 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
SMPD1-210ENST00000534405 GOLGA6L7A0A1B0GV03 622 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 GBP2P32456 591 aaPredicted RBP21.33■■□□□ 1
SMPD1-210ENST00000534405 BICDL1Q6ZP65 573 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 KIAA1328Q86T90 577 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 MLKLQ8NB16 471 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 SPATA20Q8TB22 786 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 BRIP1Q9BX63 1249 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 HOMER3Q9NSC5 361 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 TPX2Q9ULW0 747 aaKnown RBP21.33■■□□□ 1
SMPD1-210ENST00000534405 CEP131Q9UPN4 1083 aa21.33■■□□□ 1
SMPD1-210ENST00000534405 THRAP3Q9Y2W1 955 aaKnown RBP21.33■■□□□ 1
SMPD1-210ENST00000534405 NRAPQ86VF7 1730 aa21.32■■□□□ 1
SMPD1-210ENST00000534405 A0A1B0GTH6 734 aa21.32■■□□□ 1
SMPD1-210ENST00000534405 NPY5RQ15761 445 aa21.32■■□□□ 1
SMPD1-210ENST00000534405 KIRREL3Q8IZU9 778 aa21.32■■□□□ 1
SMPD1-210ENST00000534405 ENOX1Q8TC92 643 aaKnown RBP21.32■■□□□ 1
SMPD1-210ENST00000534405 ZNF473Q8WTR7 871 aaKnown RBP21.32■■□□□ 1
SMPD1-210ENST00000534405 NUCKS1Q9H1E3 243 aaKnown RBP21.32■■□□□ 1
SMPD1-210ENST00000534405 SAMSN1Q9NSI8 373 aaKnown RBP21.32■■□□□ 1
SMPD1-210ENST00000534405 SCN7AQ01118 1682 aa21.32■■□□□ 1
SMPD1-210ENST00000534405 CASZ1Q86V15 1759 aa21.32■■□□□ 1
SMPD1-210ENST00000534405 TRIM75PA6NK02 468 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 USP17L12C9JPN9 530 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 USP17L21D6R901 530 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 PRPF3O43395 683 aaKnown RBP21.31■■□□□ 1
SMPD1-210ENST00000534405 ABL1P00519 1130 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 CASP1P29466 404 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 CAVIN4Q5BKX8 364 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 C6orf89Q6UWU4 347 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 GSPT2Q8IYD1 628 aaKnown RBP21.31■■□□□ 1
SMPD1-210ENST00000534405 LINC00116Q8NCU8 138 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 HOOK2Q96ED9 719 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 RSRC1Q96IZ7 334 aaKnown RBP21.31■■□□□ 1
SMPD1-210ENST00000534405 CPSF2Q9P2I0 782 aaKnown RBP21.31■■□□□ 1
SMPD1-210ENST00000534405 AHDC1Q5TGY3 1603 aaPredicted RBP21.31■■□□□ 1
SMPD1-210ENST00000534405 NMT2O60551 498 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 FGRP09769 529 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 KRT2P35908 639 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 RBL2Q08999 1139 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 PPP2R5BQ15173 497 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 CATIPQ7Z7H3 387 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 PPFIBP1Q86W92 1011 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 MMS19Q96T76 1030 aa21.31■■□□□ 1
SMPD1-210ENST00000534405 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 1
SMPD1-210ENST00000534405 BAZ2BQ9UIF8 2168 aaKnown RBP21.31■■□□□ 1
SMPD1-210ENST00000534405 PECAM1P16284 738 aaPredicted RBP21.3■■□□□ 1
SMPD1-210ENST00000534405 IFFO1Q0D2I5 559 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 TTMPQ5BVD1 217 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 CLEC4GQ6UXB4 293 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 ACRBPQ8NEB7 543 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 SPDL1Q96EA4 605 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 SAAL1Q96ER3 474 aa21.3■■□□□ 1
SMPD1-210ENST00000534405 COL5A3P25940 1745 aaPredicted RBP21.3■■□□□ 1
SMPD1-210ENST00000534405 AP1G2O75843 785 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms