RNA–Protein interactions for RNA: ENST00000534159.5

CHRDL2-208, Transcript of chordin like 2, humanhuman

TSL 2

Gene CHRDL2, Length 1,971 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-208ENST00000534159 MORC2Q9Y6X9 1032 aaPredicted RBP16.01■□□□□ 0.15
CHRDL2-208ENST00000534159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
CHRDL2-208ENST00000534159 CTAGE5O15320 804 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 CCNT1O60563 726 aaKnown RBP16■□□□□ 0.15
CHRDL2-208ENST00000534159 USP2O75604 605 aaPredicted RBP16■□□□□ 0.15
CHRDL2-208ENST00000534159 ZNF280CQ8ND82 737 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 TANGO6Q9C0B7 1094 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 SRCAPQ6ZRS2 3230 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 VWA3AA6NCI4 1184 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 IQCA1LA6NCM1 817 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 PPP1R12BO60237 982 aaPredicted RBP16■□□□□ 0.15
CHRDL2-208ENST00000534159 TAL1P17542 331 aaPredicted RBP16■□□□□ 0.15
CHRDL2-208ENST00000534159 TRAF1Q13077 416 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 PANK2Q9BZ23 570 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 RANBP17Q9H2T7 1088 aaKnown RBP16■□□□□ 0.15
CHRDL2-208ENST00000534159 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 HPSEQ9Y251 543 aa16■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L15C9J2P7 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L13C9JLJ4 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L11C9JVI0 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L18D6R9N7 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L22D6RA61 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L17D6RBQ6 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L19D6RCP7 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L20D6RJB6 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 BACE1P56817 501 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L24Q0WX57 530 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 USP17L6PQ6QN14 398 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 ZC3H15Q8WU90 426 aaKnown RBP15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 SLF1Q9BQI6 1058 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 RBSNQ9H1K0 784 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 TAF1DQ9H5J8 278 aaPredicted RBP15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 EMILIN3Q9NT22 766 aa15.99■□□□□ 0.15
CHRDL2-208ENST00000534159 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 CCDC192P0DO97 292 aa15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 NF2P35240 595 aa15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 NOL9Q5SY16 702 aaKnown RBP15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 SASS6Q6UVJ0 657 aa15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 VCAM1P19320 739 aa15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 CLK2P49760 499 aaKnown RBP15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 RPAP3Q9H6T3 665 aaPredicted RBP15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
CHRDL2-208ENST00000534159 FLOT1O75955 427 aa15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 IREB2P48200 963 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 HMGCS2P54868 508 aa15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 ARL6IP4Q66PJ3 421 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 RBM43Q6ZSC3 357 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 PRPF38AQ8NAV1 312 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 RNF214Q8ND24 703 aa15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 ANP32BQ92688 251 aaKnown RBP15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 CDCA5Q96FF9 252 aa15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 CTDP1Q9Y5B0 961 aaPredicted RBP15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 SCN4AP35499 1836 aa15.97■□□□□ 0.15
CHRDL2-208ENST00000534159 VGLL4Q14135 290 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 IL17AQ16552 155 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 DTHD1Q6ZMT9 781 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 USP49Q70CQ1 688 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 SYMPKQ92797 1274 aaKnown RBP15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 EPSTI1Q96J88 318 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 TIGD1Q96MW7 591 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 CSADQ9Y600 493 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 C19orf81C9J6K1 198 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 LAD1O00515 517 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 MEIS2O14770 477 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 POLR2DO15514 142 aaKnown RBP15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 NEMFO60524 1076 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 TYRO3Q06418 890 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 PDILTQ8N807 584 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 FUCA2Q9BTY2 467 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 TMOD4Q9NZQ9 345 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 MRPL11Q9Y3B7 192 aaKnown RBP15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 SNCAIPQ9Y6H5 919 aa15.96■□□□□ 0.15
CHRDL2-208ENST00000534159 PHIPQ8WWQ0 1821 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 POTECB2RU33 542 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 OR52Z1P0C646 297 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 CCDC173Q0VFZ6 552 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 ORC2Q13416 577 aaPredicted RBP15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 LONRF3Q496Y0 759 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 PNMA8AQ86V59 439 aaPredicted RBP15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 LDHDQ86WU2 507 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 CNNM3Q8NE01 707 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 ERCC4Q92889 916 aaPredicted RBP15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 ANO3Q9BYT9 981 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 SMCHD1A6NHR9 2005 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 ABCB11O95342 1321 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 SPDYE3A6NKU9 549 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 TDP2O95551 362 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 HOXA13P31271 388 aaPredicted RBP15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 LONP1P36776 959 aaKnown RBP15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 AP3B2Q13367 1082 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 MCTP2Q6DN12 878 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 KRBA2Q6ZNG9 492 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
CHRDL2-208ENST00000534159 PPP1R9AQ9ULJ8 1098 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms