RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 TNMDQ9H2S6 317 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 VCPKMTQ9H867 229 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 RTEL1Q9NZ71 1219 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 NID2Q14112 1375 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 CTNND1O60716 968 aaKnown RBP10.88□□□□□ -0.67
RTL1-201ENST00000534062 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 FBXO11Q86XK2 927 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 SPTLC3Q9NUV7 552 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 TMEM260Q9NX78 707 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 TMX2Q9Y320 296 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 ECM29Q5VYK3 1845 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 MYH6P13533 1939 aa10.88□□□□□ -0.67
RTL1-201ENST00000534062 IQCA1LA6NCM1 817 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 GLTPD2A6NH11 291 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 CTIFO43310 598 aaKnown RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 TBC1D12O60347 775 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 HMGCS2P54868 508 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 MAP1SQ66K74 1059 aaPredicted RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 PSTPIP2Q9H939 334 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 RCOR1Q9UKL0 485 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 MYCNP04198 464 aaPredicted RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 NCBP1Q09161 790 aaKnown RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 MOB2Q70IA6 237 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 SHISA4Q96DD7 197 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 NR1I2O75469 434 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 YEATS4O95619 227 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 CCDC183Q5T5S1 534 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 MRPS27Q92552 414 aaKnown RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 MKL1Q969V6 931 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 RIOX1Q9H6W3 641 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 AS3MTQ9HBK9 375 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 VWA3AA6NCI4 1184 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L15C9J2P7 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L13C9JLJ4 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L11C9JVI0 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L18D6R9N7 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L22D6RA61 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L17D6RBQ6 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L19D6RCP7 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L20D6RJB6 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 ADAMTS3O15072 1205 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 CFBP00751 764 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 MRPL12P52815 198 aaKnown RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L24Q0WX57 530 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 PLS1Q14651 629 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 USP17L6PQ6QN14 398 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 CUL5Q93034 780 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 CCDC47Q96A33 483 aaKnown RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 AMNQ9BXJ7 453 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 FEZ2Q9UHY8 353 aaPredicted RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 DDX41Q9UJV9 622 aaKnown RBP10.87□□□□□ -0.67
RTL1-201ENST00000534062 PRR12Q9ULL5 1215 aa10.87□□□□□ -0.67
RTL1-201ENST00000534062 CCNT1O60563 726 aaKnown RBP10.86□□□□□ -0.67
RTL1-201ENST00000534062 NONOQ15233 471 aaKnown RBP eCLIP10.86□□□□□ -0.67
RTL1-201ENST00000534062 METTL16Q86W50 562 aaKnown RBP10.86□□□□□ -0.67
RTL1-201ENST00000534062 SCYL3Q8IZE3 742 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 TMEM87AQ8NBN3 555 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 TMOD4Q9NZQ9 345 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 ARFGEF1Q9Y6D6 1849 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 MKRN3Q13064 507 aaKnown RBP10.86□□□□□ -0.67
RTL1-201ENST00000534062 SLC39A14Q15043 492 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 KIAA1755Q5JYT7 1200 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 ERCC4Q92889 916 aaPredicted RBP10.86□□□□□ -0.67
RTL1-201ENST00000534062 OTUD5Q96G74 571 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 ELP3Q9H9T3 547 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 ELP1O95163 1332 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 SNHG28P0DPA3 235 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 KRI1Q8N9T8 703 aaKnown RBP10.86□□□□□ -0.67
RTL1-201ENST00000534062 GMCL1P1Q8NEA9 526 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 SH3GLB2Q9NR46 395 aa10.86□□□□□ -0.67
RTL1-201ENST00000534062 HOXA13P31271 388 aaPredicted RBP10.85□□□□□ -0.67
RTL1-201ENST00000534062 IREB2P48200 963 aaKnown RBP10.85□□□□□ -0.67
RTL1-201ENST00000534062 TOB1P50616 345 aaPredicted RBP10.85□□□□□ -0.67
RTL1-201ENST00000534062 PTGDRQ13258 359 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 RRAGCQ9HB90 399 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 PHF20L1A8MW92 1017 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 PRR29P0C7W0 189 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 KRT25Q7Z3Z0 450 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 ZNF280CQ8ND82 737 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 TBCKQ8TEA7 893 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 GMCL1Q96IK5 515 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 PCDHA6Q9UN73 950 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 PCDHA8Q9Y5H6 950 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 MYH4Q9Y623 1939 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 ALAS1P13196 640 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 ZNF76P36508 570 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 GADL1Q6ZQY3 521 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 TAF1DQ9H5J8 278 aaPredicted RBP10.85□□□□□ -0.67
RTL1-201ENST00000534062 RPAP3Q9H6T3 665 aaPredicted RBP10.85□□□□□ -0.67
RTL1-201ENST00000534062 PSME4Q14997 1843 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 FOCADQ5VW36 1801 aa10.85□□□□□ -0.67
RTL1-201ENST00000534062 CCPG1Q9ULG6 757 aa10.84□□□□□ -0.67
RTL1-201ENST00000534062 POLR2AP24928 1970 aaKnown RBP10.84□□□□□ -0.67
RTL1-201ENST00000534062 SYKP43405 635 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms