RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 NUP43Q8NFH3 380 aa6.27□□□□□ -1.41
ITGB1-219ENST00000534049 ZDHHC15Q96MV8 337 aa6.27□□□□□ -1.41
ITGB1-219ENST00000534049 PLCD4Q9BRC7 762 aa6.27□□□□□ -1.41
ITGB1-219ENST00000534049 FAM86C1Q9NVL1 165 aa6.27□□□□□ -1.41
ITGB1-219ENST00000534049 SMG5Q9UPR3 1016 aaKnown RBP6.27□□□□□ -1.41
ITGB1-219ENST00000534049 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.41
ITGB1-219ENST00000534049 MYOCOSA0A1B0GUC4 107 aa6.26□□□□□ -1.41
ITGB1-219ENST00000534049 EPHX1P07099 455 aa6.26□□□□□ -1.41
ITGB1-219ENST00000534049 LINC00310P59036 64 aa6.26□□□□□ -1.41
ITGB1-219ENST00000534049 SRSF3P84103 164 aaKnown RBP6.26□□□□□ -1.41
ITGB1-219ENST00000534049 VHLLQ6RSH7 139 aa6.26□□□□□ -1.41
ITGB1-219ENST00000534049 PTCHD1Q96NR3 888 aa6.26□□□□□ -1.41
ITGB1-219ENST00000534049 FCRL3Q96P31 734 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-219ENST00000534049 TNFRSF12AQ9NP84 129 aa6.26□□□□□ -1.41
ITGB1-219ENST00000534049 IMPACTQ9P2X3 320 aa6.26□□□□□ -1.41
ITGB1-219ENST00000534049 A0A1W2PQJ5 194 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 SSBP05455 408 aaKnown RBP eCLIP6.25□□□□□ -1.41
ITGB1-219ENST00000534049 CFPP27918 469 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 AMPD2Q01433 879 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 ZNF385BQ569K4 471 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 TMEM151BQ8IW70 566 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 ARHGEF39Q8N4T4 335 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 NLGN2Q8NFZ4 835 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 KLHL6Q8WZ60 621 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 ANAPC16Q96DE5 110 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 JMJD8Q96S16 334 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 CGGBP1Q9UFW8 167 aaPredicted RBP6.25□□□□□ -1.41
ITGB1-219ENST00000534049 SUGT1Q9Y2Z0 365 aa6.25□□□□□ -1.41
ITGB1-219ENST00000534049 AURKAO14965 403 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 SRGAP3O43295 1099 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 EFEMP2O95967 443 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 L1CAMP32004 1257 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 VIPR1P32241 457 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 SEPHS1P49903 392 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 GALK1P51570 392 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 PPP2R5DQ14738 602 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 CBX2Q14781 532 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-219ENST00000534049 RAB3GAP1Q15042 981 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 KIAA1211LQ6NV74 962 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 AMIGO3Q86WK7 504 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 FAM9AQ8IZU1 332 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-219ENST00000534049 TMEM52Q8NDY8 209 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 ADCY4Q8NFM4 1077 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 APBA2Q99767 749 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 PDLIM7Q9NR12 457 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 CNOT6Q9ULM6 557 aaKnown RBP6.24□□□□□ -1.41
ITGB1-219ENST00000534049 PCDHB10Q9UN67 800 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 BACE2Q9Y5Z0 518 aa6.24□□□□□ -1.41
ITGB1-219ENST00000534049 NOP56O00567 594 aaKnown RBP6.23□□□□□ -1.41
ITGB1-219ENST00000534049 NUAK1O60285 661 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 CYBBP04839 570 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 IFNGR1P15260 489 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
ITGB1-219ENST00000534049 SPOCD1Q6ZMY3 1216 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 CABP7Q86V35 215 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 C1QL4Q86Z23 238 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 SIGLEC10Q96LC7 697 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 KCNK12Q9HB15 430 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 MBD1Q9UIS9 605 aaPredicted RBP6.23□□□□□ -1.41
ITGB1-219ENST00000534049 IRAK3Q9Y616 596 aa6.23□□□□□ -1.41
ITGB1-219ENST00000534049 N4BP3O15049 544 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 ZSCAN22P10073 491 aaPredicted RBP6.22□□□□□ -1.41
ITGB1-219ENST00000534049 MAPKAPK2P49137 400 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 FBLN7Q53RD9 439 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 PAQR3Q6TCH7 311 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 FAM169BQ8N8A8 192 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 FGD4Q96M96 766 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 GCM1Q9NP62 436 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 ACTR10Q9NZ32 417 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 AKT3Q9Y243 479 aa6.22□□□□□ -1.41
ITGB1-219ENST00000534049 C2orf71A6NGG8 1288 aa6.21□□□□□ -1.42
ITGB1-219ENST00000534049 RANGAP1P46060 587 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-219ENST00000534049 MVKQ03426 396 aa6.21□□□□□ -1.42
ITGB1-219ENST00000534049 ARID5AQ03989 594 aa6.21□□□□□ -1.42
ITGB1-219ENST00000534049 ZC3H14Q6PJT7 736 aaKnown RBP6.21□□□□□ -1.42
ITGB1-219ENST00000534049 BVESQ8NE79 360 aa6.21□□□□□ -1.42
ITGB1-219ENST00000534049 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.21□□□□□ -1.42
ITGB1-219ENST00000534049 KLHL14Q9P2G3 628 aa6.21□□□□□ -1.42
ITGB1-219ENST00000534049 PRKAG3Q9UGI9 489 aa6.21□□□□□ -1.42
ITGB1-219ENST00000534049 NUDT19A8MXV4 375 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 STXBP3O00186 592 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 PAMP19021 973 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 TARBP2Q15633 366 aaKnown RBP6.2□□□□□ -1.42
ITGB1-219ENST00000534049 FXNQ16595 210 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 TCERG1LQ5VWI1 586 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 BICRALQ6AI39 1079 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 TMC6Q7Z403 805 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 MZB1Q8WU39 189 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 SUSD2Q9UGT4 822 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 RAPGEFL1Q9UHV5 662 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 EMC9Q9Y3B6 208 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 KCTD3Q9Y597 815 aa6.2□□□□□ -1.42
ITGB1-219ENST00000534049 NPHP3-ACAD11A0A0J9YXS1 232 aa6.19□□□□□ -1.42
ITGB1-219ENST00000534049 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
ITGB1-219ENST00000534049 PFKLP17858 780 aa6.19□□□□□ -1.42
ITGB1-219ENST00000534049 DPY19L1Q2PZI1 675 aa6.19□□□□□ -1.42
ITGB1-219ENST00000534049 PLEKHN1Q494U1 663 aaPredicted RBP6.19□□□□□ -1.42
ITGB1-219ENST00000534049 RPTNQ6XPR3 784 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms