RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 HTATIP2Q9BUP3 242 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 LRRC2Q9BYS8 371 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 CRISPLD2Q9H0B8 497 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 ADD3Q9UEY8 706 aaKnown RBP15.56■□□□□ 0.08
CAPN1-227ENST00000533909 ZHX1Q9UKY1 873 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-227ENST00000533909 ABCB11O95342 1321 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 SYNGAP1Q96PV0 1343 aa15.56■□□□□ 0.08
CAPN1-227ENST00000533909 PLXNA1Q9UIW2 1896 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 ASB14A6NK59 587 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 NFIBO00712 420 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 SEPT4O43236 478 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 EIF5BO60841 1220 aaKnown RBP15.55■□□□□ 0.08
CAPN1-227ENST00000533909 CALML3P27482 149 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 PSMA5P28066 241 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 HSPA4P34932 840 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 LIFRP42702 1097 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 CNTN2Q02246 1040 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 TROAPQ12815 778 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 TSGA10IPQ3SY00 556 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 RNF207Q6ZRF8 634 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 DHX32Q7L7V1 743 aaKnown RBP15.55■□□□□ 0.08
CAPN1-227ENST00000533909 NECAB2Q7Z6G3 386 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 TRPV1Q8NER1 839 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 JAKMIP1Q96N16 626 aaKnown RBP15.55■□□□□ 0.08
CAPN1-227ENST00000533909 LZTS2Q9BRK4 669 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 MYL10Q9BUA6 226 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 JMJD4Q9H9V9 463 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 GPHNQ9NQX3 736 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-227ENST00000533909 CYP39A1Q9NYL5 469 aa15.55■□□□□ 0.08
CAPN1-227ENST00000533909 NAP1L2Q9ULW6 460 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-227ENST00000533909 MRPL11Q9Y3B7 192 aaKnown RBP15.55■□□□□ 0.08
CAPN1-227ENST00000533909 RARBP10826 455 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 GNAQP50148 359 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 BAATQ14032 418 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-227ENST00000533909 BLOC1S2Q6QNY1 142 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 MCF2L2Q86YR7 1114 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 CCDC144CPQ8IYA2 1237 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 FAM133AQ8N9E0 248 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 PAWRQ96IZ0 340 aaKnown RBP15.54■□□□□ 0.08
CAPN1-227ENST00000533909 MAP3K14Q99558 947 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-227ENST00000533909 SEC63Q9UGP8 760 aaKnown RBP15.54■□□□□ 0.08
CAPN1-227ENST00000533909 OGDHLQ9ULD0 1010 aa15.54■□□□□ 0.08
CAPN1-227ENST00000533909 B4DLN1 442 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 ZBTB5O15062 677 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 EPB41L2O43491 1005 aaKnown RBP15.53■□□□□ 0.08
CAPN1-227ENST00000533909 AKR1A1P14550 325 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 MRPL12P52815 198 aaKnown RBP15.53■□□□□ 0.08
CAPN1-227ENST00000533909 ADCK5Q3MIX3 580 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 ANO1Q5XXA6 986 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 LHX8Q68G74 356 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 ARMCX2Q7L311 632 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 MICU3Q86XE3 530 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 ARRDC4Q8NCT1 418 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 DPF3Q92784 378 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 TCEANC2Q96MN5 208 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 ABHD16BQ9H3Z7 469 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
CAPN1-227ENST00000533909 CEP290O15078 2479 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 IGHA2P01877 340 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 RXRAP19793 462 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 RPS6P62753 249 aaKnown RBP15.52■□□□□ 0.08
CAPN1-227ENST00000533909 ACVR2BQ13705 512 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 SLC30A10Q6XR72 485 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 NOL8Q76FK4 1167 aaKnown RBP15.52■□□□□ 0.08
CAPN1-227ENST00000533909 RAB11FIP4Q86YS3 637 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 CLEC4DQ8WXI8 215 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.08
CAPN1-227ENST00000533909 PIGSQ96S52 555 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 C11orf49Q9H6J7 331 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 PCDHA1Q9Y5I3 950 aa15.52■□□□□ 0.08
CAPN1-227ENST00000533909 BRCA2P51587 3418 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 SOWAHBA6NEL2 793 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 KBTBD13C9JR72 458 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
CAPN1-227ENST00000533909 EXOSC10Q01780 885 aaKnown RBP15.51■□□□□ 0.07
CAPN1-227ENST00000533909 SGMS1Q86VZ5 419 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 RGS22Q8NE09 1264 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 DIS3LQ8TF46 1054 aaKnown RBP15.51■□□□□ 0.07
CAPN1-227ENST00000533909 RIOX1Q9H6W3 641 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 XPNPEP3Q9NQH7 507 aa15.51■□□□□ 0.07
CAPN1-227ENST00000533909 KLF18A0A0U1RQI7 1052 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 ZBTB43O43298 467 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 SNAI1O95863 264 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-227ENST00000533909 CFBP00751 764 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 PDE4DQ08499 809 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 COL9A3Q14050 684 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-227ENST00000533909 RNF180Q86T96 592 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 FANCBQ8NB91 859 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 KCNB2Q92953 911 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 FGD4Q96M96 766 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 SPZ1Q9BXG8 430 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 USP26Q9BXU7 913 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 MAF1Q9H063 256 aa15.5■□□□□ 0.07
CAPN1-227ENST00000533909 SPC25Q9HBM1 224 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms