RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TTC6Q86TZ1 520 aa12.92□□□□□ -0.34
CSDE1-215ENST00000533818 RPAINQ86UA6 219 aa12.92□□□□□ -0.34
CSDE1-215ENST00000533818 TLK2Q86UE8 772 aa12.92□□□□□ -0.34
CSDE1-215ENST00000533818 KMT2EQ8IZD2 1858 aa12.92□□□□□ -0.34
CSDE1-215ENST00000533818 MAGEB6Q8N7X4 407 aa12.92□□□□□ -0.34
CSDE1-215ENST00000533818 ZNF214Q9UL59 606 aaPredicted RBP12.92□□□□□ -0.34
CSDE1-215ENST00000533818 DMXL1Q9Y485 3027 aa12.91□□□□□ -0.34
CSDE1-215ENST00000533818 ZNF292O60281 2723 aa12.91□□□□□ -0.34
CSDE1-215ENST00000533818 DYNLL1P63167 89 aaKnown RBP12.91□□□□□ -0.34
CSDE1-215ENST00000533818 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
CSDE1-215ENST00000533818 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
CSDE1-215ENST00000533818 ASIC4Q96FT7 647 aa12.91□□□□□ -0.34
CSDE1-215ENST00000533818 NEUROD6Q96NK8 337 aa12.91□□□□□ -0.34
CSDE1-215ENST00000533818 NSUN3Q9H649 340 aaKnown RBP12.91□□□□□ -0.34
CSDE1-215ENST00000533818 FBXO28Q9NVF7 368 aa12.91□□□□□ -0.34
CSDE1-215ENST00000533818 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
CSDE1-215ENST00000533818 GNEQ9Y223 722 aaKnown RBP12.91□□□□□ -0.34
CSDE1-215ENST00000533818 AKAP2Q9Y2D5 859 aa12.91□□□□□ -0.34
CSDE1-215ENST00000533818 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
CSDE1-215ENST00000533818 USP5P45974 858 aa12.9□□□□□ -0.34
CSDE1-215ENST00000533818 SMAD4Q13485 552 aaKnown RBP12.9□□□□□ -0.34
CSDE1-215ENST00000533818 MCTP2Q6DN12 878 aa12.9□□□□□ -0.34
CSDE1-215ENST00000533818 FAM117BQ6P1L5 589 aa12.9□□□□□ -0.34
CSDE1-215ENST00000533818 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
CSDE1-215ENST00000533818 KATNBL1Q9H079 304 aa12.9□□□□□ -0.34
CSDE1-215ENST00000533818 SCN5AQ14524 2016 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 PTGS1P23219 599 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 DLX2Q07687 328 aaPredicted RBP12.89□□□□□ -0.35
CSDE1-215ENST00000533818 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
CSDE1-215ENST00000533818 BFSP2Q13515 415 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 PUM1Q14671 1186 aaKnown RBP eCLIP12.89□□□□□ -0.351e-7■□□□□ 9
CSDE1-215ENST00000533818 ST3GAL2Q16842 350 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 EPC2Q52LR7 807 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 TMX2Q9Y320 296 aa12.89□□□□□ -0.35
CSDE1-215ENST00000533818 MCAMP43121 646 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 PLCD1P51178 756 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 GPM6BQ13491 265 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 SNRNP48Q6IEG0 339 aaKnown RBP12.88□□□□□ -0.35
CSDE1-215ENST00000533818 REPS2Q8NFH8 660 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 FGD4Q96M96 766 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 CD207Q9UJ71 328 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 RIPK3Q9Y572 518 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 INSL6Q9Y581 213 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 CDK5RAP2Q96SN8 1893 aa12.88□□□□□ -0.35
CSDE1-215ENST00000533818 DMDP11532 3685 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 H3BNC9 293 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 SMPD1P17405 629 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 ARID4AP29374 1257 aaPredicted RBP12.87□□□□□ -0.35
CSDE1-215ENST00000533818 TFCP2Q12800 502 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
CSDE1-215ENST00000533818 SIAH1Q8IUQ4 282 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 ANKRD35Q8N283 1001 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
CSDE1-215ENST00000533818 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 SNRKQ9NRH2 765 aa12.87□□□□□ -0.35
CSDE1-215ENST00000533818 EP300Q09472 2414 aaPredicted RBP12.86□□□□□ -0.35
CSDE1-215ENST00000533818 ABHD14A-ACY1A0A1B0GW23 586 aa12.86□□□□□ -0.35
CSDE1-215ENST00000533818 PDGFBP01127 241 aaPredicted RBP12.86□□□□□ -0.35
CSDE1-215ENST00000533818 CNKSR3Q6P9H4 555 aa12.86□□□□□ -0.35
CSDE1-215ENST00000533818 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
CSDE1-215ENST00000533818 COPRSQ9NQ92 184 aa12.86□□□□□ -0.35
CSDE1-215ENST00000533818 Q9Y3F1 56 aa12.86□□□□□ -0.35
CSDE1-215ENST00000533818 POLR3DP05423 398 aaPredicted RBP12.85□□□□□ -0.35
CSDE1-215ENST00000533818 UQCRFS1P1P0C7P4 283 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 CYP7A1P22680 504 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 HYAL1Q12794 435 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
CSDE1-215ENST00000533818 IQSEC1Q6DN90 963 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 KIAA2013Q8IYS2 634 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 RIPOR3Q96MK2 946 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
CSDE1-215ENST00000533818 SIP14410 1827 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 ANKRD11Q6UB99 2663 aaPredicted RBP12.84□□□□□ -0.35
CSDE1-215ENST00000533818 EFCAB14O75071 495 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 MYL3P08590 195 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
CSDE1-215ENST00000533818 ICA1Q05084 483 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 GABPAQ06546 454 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 IKBKEQ14164 716 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 GPNMBQ14956 572 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 MIGA1Q8NAN2 632 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 TET1Q8NFU7 2136 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 PPP1R13LQ8WUF5 828 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
CSDE1-215ENST00000533818 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 RALYQ9UKM9 306 aaKnown RBP12.84□□□□□ -0.35
CSDE1-215ENST00000533818 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
CSDE1-215ENST00000533818 TBX10O75333 385 aa12.83□□□□□ -0.36
CSDE1-215ENST00000533818 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms