RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SYDE2Q5VT97 1194 aa20■□□□□ 0.79
CTSB-229ENST00000533572 APOA5Q6Q788 366 aa20■□□□□ 0.79
CTSB-229ENST00000533572 ANKRD35Q8N283 1001 aa20■□□□□ 0.79
CTSB-229ENST00000533572 CRISPLD2Q9H0B8 497 aa20■□□□□ 0.79
CTSB-229ENST00000533572 HOMER2Q9NSB8 354 aa20■□□□□ 0.79
CTSB-229ENST00000533572 RIPK3Q9Y572 518 aa20■□□□□ 0.79
CTSB-229ENST00000533572 PARP1P09874 1014 aaKnown RBP19.99■□□□□ 0.79
CTSB-229ENST00000533572 SLC16A2P36021 539 aa19.99■□□□□ 0.79
CTSB-229ENST00000533572 TKFCQ3LXA3 575 aa19.99■□□□□ 0.79
CTSB-229ENST00000533572 MAML3Q96JK9 1138 aa19.99■□□□□ 0.79
CTSB-229ENST00000533572 ZSCAN31Q96LW9 406 aaPredicted RBP19.99■□□□□ 0.79
CTSB-229ENST00000533572 LZTS2Q9BRK4 669 aa19.99■□□□□ 0.79
CTSB-229ENST00000533572 HTATIP2Q9BUP3 242 aa19.99■□□□□ 0.79
CTSB-229ENST00000533572 ACAD9Q9H845 621 aa19.99■□□□□ 0.79
CTSB-229ENST00000533572 GPHNQ9NQX3 736 aaPredicted RBP19.99■□□□□ 0.79
CTSB-229ENST00000533572 RBM28Q9NW13 759 aaKnown RBP19.99■□□□□ 0.79
CTSB-229ENST00000533572 DIS3Q9Y2L1 958 aaKnown RBP19.99■□□□□ 0.79
CTSB-229ENST00000533572 MSCO60682 206 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 ALAS1P13196 640 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 ZNF543Q08ER8 600 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 APOBRQ0VD83 1088 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 GRM4Q14833 912 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 PRPF38BQ5VTL8 546 aaKnown RBP19.98■□□□□ 0.79
CTSB-229ENST00000533572 TTBK2Q6IQ55 1244 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 BTNL9Q6UXG8 535 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 ANKLE1Q8NAG6 615 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 NUP133Q8WUM0 1156 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 SENP2Q9HC62 589 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 RNF146Q9NTX7 359 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 CCPG1Q9ULG6 757 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 LIMCH1Q9UPQ0 1083 aa19.98■□□□□ 0.79
CTSB-229ENST00000533572 DHX16O60231 1041 aaKnown RBP19.97■□□□□ 0.79
CTSB-229ENST00000533572 SMARCA1P28370 1054 aa19.97■□□□□ 0.79
CTSB-229ENST00000533572 METAP2P50579 478 aaKnown RBP eCLIP19.97■□□□□ 0.791e-6■■■■■ 30
CTSB-229ENST00000533572 SNAP25P60880 206 aa19.97■□□□□ 0.79
CTSB-229ENST00000533572 ZNF792Q3KQV3 632 aa19.97■□□□□ 0.79
CTSB-229ENST00000533572 FANCBQ8NB91 859 aa19.97■□□□□ 0.79
CTSB-229ENST00000533572 AGBL1Q96MI9 1066 aa19.97■□□□□ 0.79
CTSB-229ENST00000533572 SH2B1Q9NRF2 756 aaPredicted RBP19.97■□□□□ 0.79
CTSB-229ENST00000533572 PNMA2Q9UL42 364 aa19.97■□□□□ 0.79
CTSB-229ENST00000533572 BRPF3Q9ULD4 1205 aa19.97■□□□□ 0.79
CTSB-229ENST00000533572 NAP1L2Q9ULW6 460 aaPredicted RBP19.97■□□□□ 0.79
CTSB-229ENST00000533572 ZNFX1Q9P2E3 1918 aaKnown RBP19.97■□□□□ 0.79
CTSB-229ENST00000533572 NID2Q14112 1375 aa19.96■□□□□ 0.79
CTSB-229ENST00000533572 GOLGA8BA8MQT2 603 aa19.96■□□□□ 0.79
CTSB-229ENST00000533572 NECAB2Q7Z6G3 386 aa19.96■□□□□ 0.79
CTSB-229ENST00000533572 MICU3Q86XE3 530 aa19.96■□□□□ 0.79
CTSB-229ENST00000533572 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
CTSB-229ENST00000533572 RANBP17Q9H2T7 1088 aaKnown RBP19.96■□□□□ 0.79
CTSB-229ENST00000533572 DDX20Q9UHI6 824 aaKnown RBP19.96■□□□□ 0.79
CTSB-229ENST00000533572 OGDHLQ9ULD0 1010 aa19.96■□□□□ 0.79
CTSB-229ENST00000533572 PALM3A6NDB9 673 aaPredicted RBP19.95■□□□□ 0.78
CTSB-229ENST00000533572 GOLGA8AA7E2F4 631 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 ICAM1P05362 532 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 GOLGA8HP0CJ92 632 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 CYBAP13498 195 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 PDIA3P30101 505 aaKnown RBP19.95■□□□□ 0.78
CTSB-229ENST00000533572 RTN1Q16799 776 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 CPLX2Q6PUV4 134 aaKnown RBP19.95■□□□□ 0.78
CTSB-229ENST00000533572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.95■□□□□ 0.78
CTSB-229ENST00000533572 DPF3Q92784 378 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 TINF2Q9BSI4 451 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 SLKQ9H2G2 1235 aaPredicted RBP19.95■□□□□ 0.78
CTSB-229ENST00000533572 CNPY2Q9Y2B0 182 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 ZNF536O15090 1300 aa19.95■□□□□ 0.78
CTSB-229ENST00000533572 POTEB2H3BUK9 544 aa19.94■□□□□ 0.78
CTSB-229ENST00000533572 MSL3Q8N5Y2 521 aaKnown RBP19.94■□□□□ 0.78
CTSB-229ENST00000533572 PAWRQ96IZ0 340 aaKnown RBP19.94■□□□□ 0.78
CTSB-229ENST00000533572 NRBP1Q9UHY1 535 aa19.94■□□□□ 0.78
CTSB-229ENST00000533572 MAD2L2Q9UI95 211 aa19.94■□□□□ 0.78
CTSB-229ENST00000533572 TPCN1Q9ULQ1 816 aa19.94■□□□□ 0.78
CTSB-229ENST00000533572 PFASO15067 1338 aa19.94■□□□□ 0.78
CTSB-229ENST00000533572 PLXNA1Q9UIW2 1896 aa19.94■□□□□ 0.78
CTSB-229ENST00000533572 KLRF2D3W0D1 207 aa19.93■□□□□ 0.78
CTSB-229ENST00000533572 PFKFB2O60825 505 aa19.93■□□□□ 0.78
CTSB-229ENST00000533572 UBE2Q1Q7Z7E8 422 aa19.93■□□□□ 0.78
CTSB-229ENST00000533572 SNX21Q969T3 373 aa19.93■□□□□ 0.78
CTSB-229ENST00000533572 MYL10Q9BUA6 226 aa19.93■□□□□ 0.78
CTSB-229ENST00000533572 MKI67P46013 3256 aaKnown RBP19.92■□□□□ 0.78
CTSB-229ENST00000533572 DNAJC25-GNG10A0A024R161 153 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 SEPT4O43236 478 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 IGHA2P01877 340 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 PRAMEF19Q5SWL8 479 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 LHX8Q68G74 356 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 TRPV1Q8NER1 839 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 DIS3LQ8TF46 1054 aaKnown RBP19.92■□□□□ 0.78
CTSB-229ENST00000533572 UBA5Q9GZZ9 404 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 A1CFQ9NQ94 594 aaKnown RBP19.92■□□□□ 0.78
CTSB-229ENST00000533572 SYNGAP1Q96PV0 1343 aa19.92■□□□□ 0.78
CTSB-229ENST00000533572 CPLX1O14810 134 aa19.91■□□□□ 0.78
CTSB-229ENST00000533572 CDKL5O76039 1030 aa19.91■□□□□ 0.78
CTSB-229ENST00000533572 TRAF1Q13077 416 aa19.91■□□□□ 0.78
CTSB-229ENST00000533572 ZNF467Q7Z7K2 595 aaPredicted RBP19.91■□□□□ 0.78
CTSB-229ENST00000533572 SPZ1Q9BXG8 430 aa19.91■□□□□ 0.78
CTSB-229ENST00000533572 C11orf49Q9H6J7 331 aa19.91■□□□□ 0.78
CTSB-229ENST00000533572 RBM27Q9P2N5 1060 aaKnown RBP19.91■□□□□ 0.78
CTSB-229ENST00000533572 ME3Q16798 604 aa19.9■□□□□ 0.78
CTSB-229ENST00000533572 MUM1L1Q5H9M0 696 aa19.9■□□□□ 0.78
CTSB-229ENST00000533572 TMTC3Q6ZXV5 915 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms