RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 GNASQ5JWF2 1037 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 TMEM240Q5SV17 173 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 ARMCX2Q7L311 632 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 IFNL3Q8IZI9 196 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 ZNF444Q8N0Y2 327 aaPredicted RBP10.3□□□□□ -0.76
COPB1-210ENST00000533533 USP38Q8NB14 1042 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 CHST13Q8NET6 341 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 TIFAQ96CG3 184 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 CEP95Q96GE4 821 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 ZNF287Q9HBT7 754 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 EPB41L4AQ9HCS5 686 aaPredicted RBP10.3□□□□□ -0.76
COPB1-210ENST00000533533 PRDM6Q9NQX0 595 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 PPP4R2Q9NY27 417 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 MTMR4Q9NYA4 1195 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 FEM1BQ9UK73 627 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 SYNPO2Q9UMS6 1093 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 PRRC2BQ5JSZ5 2229 aaKnown RBP10.3□□□□□ -0.76
COPB1-210ENST00000533533 TRANK1O15050 2925 aa10.3□□□□□ -0.76
COPB1-210ENST00000533533 CTAGE5O15320 804 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 PRDM1O75626 825 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 TTLL1O95922 423 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 CSF2RAP15509 400 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 MFAP1P55081 439 aaKnown RBP10.29□□□□□ -0.76
COPB1-210ENST00000533533 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 VPS53Q5VIR6 699 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 ZNF589Q86UQ0 364 aaPredicted RBP10.29□□□□□ -0.76
COPB1-210ENST00000533533 FAM126BQ8IXS8 530 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 CCDC144CPQ8IYA2 1237 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 TMEM199Q8N511 208 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 GMCL1P1Q8NEA9 526 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 PBX4Q9BYU1 374 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 KATNBL1Q9H079 304 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 CCDC171Q6TFL3 1326 aa10.29□□□□□ -0.76
COPB1-210ENST00000533533 GRXCR1A8MXD5 290 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 SLC3A2P08195 630 aaKnown RBP10.28□□□□□ -0.76
COPB1-210ENST00000533533 FDX1P10109 184 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 BMP3P12645 472 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 PBX2P40425 430 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 NKX3-2P78367 333 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 CNTN2Q02246 1040 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 SLFN13Q68D06 897 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 PSRC1Q6PGN9 363 aaPredicted RBP10.28□□□□□ -0.76
COPB1-210ENST00000533533 ZNF365Q70YC5 407 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
COPB1-210ENST00000533533 FAM133AQ8N9E0 248 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 PPP1R12CQ9BZL4 782 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 TOMM22Q9NS69 142 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 HOMER2Q9NSB8 354 aa10.28□□□□□ -0.76
COPB1-210ENST00000533533 PLIN4Q96Q06 1357 aa10.27□□□□□ -0.76
COPB1-210ENST00000533533 TMEM232C9JQI7 657 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 TLR3O15455 904 aaKnown RBP10.27□□□□□ -0.77
COPB1-210ENST00000533533 CD4P01730 458 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 TSPY3P0CV98 308 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 TSPY8P0CW00 308 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 ACRP10323 421 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 BEX3Q00994 111 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 TNFAIP2Q03169 654 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 PPARAQ07869 468 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 ERICH6BQ5W0A0 696 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 NOL8Q76FK4 1167 aaKnown RBP10.27□□□□□ -0.77
COPB1-210ENST00000533533 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 SLC43A3Q8NBI5 491 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 RUFY2Q8WXA3 655 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 GAS2L1Q99501 681 aaPredicted RBP10.27□□□□□ -0.77
COPB1-210ENST00000533533 ACAD9Q9H845 621 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 REV3LO60673 3130 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 LCTP09848 1927 aa10.27□□□□□ -0.77
COPB1-210ENST00000533533 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.26□□□□□ -0.77
COPB1-210ENST00000533533 ASB14A6NK59 587 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 CABYRO75952 493 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 HSPD1P10809 573 aaKnown RBP10.26□□□□□ -0.77
COPB1-210ENST00000533533 CYP2C18P33260 490 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 STAT2P52630 851 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 HAND2P61296 217 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 PDE4BQ07343 736 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 AKNAD1Q5T1N1 836 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 CXCL17Q6UXB2 119 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 CHURC1Q8WUH1 139 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 HERVK_113Q902F9 699 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 PRDM12Q9H4Q4 367 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 IL23AQ9NPF7 189 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 A1CFQ9NQ94 594 aaKnown RBP10.26□□□□□ -0.77
COPB1-210ENST00000533533 RNF146Q9NTX7 359 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 CXXC1Q9P0U4 656 aaPredicted RBP10.26□□□□□ -0.77
COPB1-210ENST00000533533 ISY1Q9ULR0 285 aaKnown RBP10.26□□□□□ -0.77
COPB1-210ENST00000533533 GNEQ9Y223 722 aaKnown RBP10.26□□□□□ -0.77
COPB1-210ENST00000533533 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
COPB1-210ENST00000533533 ASTN1O14525 1302 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 ZNF536O15090 1300 aa10.26□□□□□ -0.77
COPB1-210ENST00000533533 LRRC37A2A6NM11 1700 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 SOWAHBA6NEL2 793 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 TNFRSF10AO00220 468 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 PLA2G6O60733 806 aa10.25□□□□□ -0.77
COPB1-210ENST00000533533 FGAP02671 866 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms