RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CERS4Q9HA82 394 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 CD320Q9NPF0 282 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 EXOC6BQ9Y2D4 811 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 Q9Y3F1 56 aa9.37□□□□□ -0.91
NXF1-215ENST00000533440 BRWD1Q9NSI6 2320 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 ASB14A6NK59 587 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 PRR33A8MZF0 331 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 DYNC1LI2O43237 492 aaPredicted RBP9.36□□□□□ -0.91
NXF1-215ENST00000533440 LPXNO60711 386 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 SMPD1P17405 629 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 PTGS1P23219 599 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 SLC4A3P48751 1232 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 PSMC6P62333 389 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 GRB10Q13322 594 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 ZKSCAN2Q63HK3 967 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 CEP85Q6P2H3 762 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 ARNTL2Q8WYA1 636 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
NXF1-215ENST00000533440 AP5M1Q9H0R1 490 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 IL1RAPL2Q9NP60 686 aa9.36□□□□□ -0.91
NXF1-215ENST00000533440 IGKV6D-41A0A0C4DH26 115 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
NXF1-215ENST00000533440 SUPT20HL2P0C7V6 817 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 FDX1P10109 184 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 ACTN1P12814 892 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 RASA1P20936 1047 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 RFC2P35250 354 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 UBE3CQ15386 1083 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 IQSEC1Q6DN90 963 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 TAPT1Q6NXT6 567 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 NOL8Q76FK4 1167 aaKnown RBP9.35□□□□□ -0.91
NXF1-215ENST00000533440 DEFB128Q7Z7B8 93 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 HERC6Q8IVU3 1022 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 RHPN1Q8TCX5 695 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 MKL1Q969V6 931 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 DDRGK1Q96HY6 314 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 ACAD9Q9H845 621 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 A1CFQ9NQ94 594 aaKnown RBP9.35□□□□□ -0.91
NXF1-215ENST00000533440 TRMT13Q9NUP7 481 aaKnown RBP9.35□□□□□ -0.91
NXF1-215ENST00000533440 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 FEM1BQ9UK73 627 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 CTDP1Q9Y5B0 961 aaPredicted RBP9.35□□□□□ -0.91
NXF1-215ENST00000533440 WDFY4Q6ZS81 3184 aa9.35□□□□□ -0.91
NXF1-215ENST00000533440 SCN5AQ14524 2016 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 TNKSO95271 1327 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 CHGBP05060 677 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 CYP2C9P11712 490 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 SBK1Q52WX2 424 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 HSP90AB4PQ58FF6 505 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 PDGFCQ9NRA1 345 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 PAG1Q9NWQ8 432 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 ARPP21Q9UBL0 812 aaPredicted RBP9.34□□□□□ -0.91
NXF1-215ENST00000533440 CLIP2Q9UDT6 1046 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 SYNPO2Q9UMS6 1093 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 SLC4A4Q9Y6R1 1079 aa9.34□□□□□ -0.91
NXF1-215ENST00000533440 ZNF536O15090 1300 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.33□□□□□ -0.92
NXF1-215ENST00000533440 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 IQCF3P0C7M6 154 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 MRE11P49959 708 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 TKFCQ3LXA3 575 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 FBXO16Q8IX29 292 aaPredicted RBP9.33□□□□□ -0.92
NXF1-215ENST00000533440 FAM178BQ8IXR5 827 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 RPAP2Q8IXW5 612 aaPredicted RBP9.33□□□□□ -0.92
NXF1-215ENST00000533440 CLASRPQ8N2M8 674 aaKnown RBP9.33□□□□□ -0.92
NXF1-215ENST00000533440 GMCL1P1Q8NEA9 526 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 MORC4Q8TE76 937 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.33□□□□□ -0.92
NXF1-215ENST00000533440 PUS7LQ9H0K6 701 aaKnown RBP9.33□□□□□ -0.92
NXF1-215ENST00000533440 MKNK2Q9HBH9 465 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 VTA1Q9NP79 307 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 HOMER2Q9NSB8 354 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 RNF146Q9NTX7 359 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
NXF1-215ENST00000533440 DDX49Q9Y6V7 483 aaKnown RBP9.33□□□□□ -0.92
NXF1-215ENST00000533440 COL4A4P53420 1690 aaPredicted RBP9.32□□□□□ -0.92
NXF1-215ENST00000533440 TET1Q8NFU7 2136 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 BAIAP3O94812 1187 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 IFIT2P09913 472 aaKnown RBP9.32□□□□□ -0.92
NXF1-215ENST00000533440 RLBP1P12271 317 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 BMP3P12645 472 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 ATP5JP18859 108 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 PURAQ00577 322 aaKnown RBP9.32□□□□□ -0.92
NXF1-215ENST00000533440 DUSP28Q4G0W2 176 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 KIAA1211Q6ZU35 1233 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 ITPRIPQ8IWB1 547 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 GJD3Q8N144 294 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 KIF1BPQ96EK5 621 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 CEP95Q96GE4 821 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 TRERF1Q96PN7 1200 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 BOLA2Q9H3K6 86 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 UBE2ZQ9H832 354 aaPredicted RBP9.32□□□□□ -0.92
NXF1-215ENST00000533440 MTMR4Q9NYA4 1195 aa9.32□□□□□ -0.92
NXF1-215ENST00000533440 MYH4Q9Y623 1939 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms