RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 KIFC2Q96AC6 838 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
CTSB-227ENST00000533110 UPF3BQ9BZI7 483 aaKnown RBP11.08□□□□□ -0.64
CTSB-227ENST00000533110 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 ZNF532Q9HCE3 1301 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 LCHNA4D1U4 455 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 GRXCR2A6NFK2 248 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 PTPN5P54829 565 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 BFSP2Q13515 415 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 ACAD9Q9H845 621 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
CTSB-227ENST00000533110 POLR3EQ9NVU0 708 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 Q9Y3F1 56 aa11.07□□□□□ -0.64
CTSB-227ENST00000533110 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 USP17L21D6R901 530 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 IQCF3P0C7M6 154 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 CPT1AP50416 773 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 OAZ1P54368 228 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 IQSEC1Q6DN90 963 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 EP400NLQ6ZTU2 488 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 C16orf86Q6ZW13 317 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.06□□□□□ -0.64
CTSB-227ENST00000533110 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 EAF2Q96CJ1 260 aaPredicted RBP11.06□□□□□ -0.64
CTSB-227ENST00000533110 ARMT1Q9H993 441 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 SUGCTQ9HAC7 445 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 SLC38A10Q9HBR0 1119 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
CTSB-227ENST00000533110 ISY1Q9ULR0 285 aaKnown RBP11.06□□□□□ -0.64
CTSB-227ENST00000533110 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 F5H6K3 240 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 H3BQ06 376 aaPredicted RBP11.05□□□□□ -0.64
CTSB-227ENST00000533110 NDUFB10O96000 172 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 MYL3P08590 195 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 PTGS1P23219 599 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 WDR5P61964 334 aaKnown RBP11.05□□□□□ -0.64
CTSB-227ENST00000533110 ZP2Q05996 745 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 KLRC3Q07444 240 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 POLA2Q14181 598 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 LRRFIP1Q32MZ4 808 aaKnown RBP11.05□□□□□ -0.64
CTSB-227ENST00000533110 TIGD5Q53EQ6 642 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
CTSB-227ENST00000533110 C12orf60Q5U649 245 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 EEPD1Q7L9B9 569 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 FBXO16Q8IX29 292 aaPredicted RBP11.05□□□□□ -0.64
CTSB-227ENST00000533110 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 FAM133AQ8N9E0 248 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 PRRX2Q99811 253 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 MTG1Q9BT17 334 aaPredicted RBP11.05□□□□□ -0.64
CTSB-227ENST00000533110 PRKAG3Q9UGI9 489 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 MYH8P13535 1937 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 RAD50Q92878 1312 aa11.05□□□□□ -0.64
CTSB-227ENST00000533110 CYP2D7A0A087X1C5 515 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 MBD4O95243 580 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 ERVK-21P61565 698 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 PURAQ00577 322 aaKnown RBP11.04□□□□□ -0.64
CTSB-227ENST00000533110 PTPROQ16827 1216 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 KIAA1211Q6ZU35 1233 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 TMCO2Q7Z6W1 182 aaPredicted RBP11.04□□□□□ -0.64
CTSB-227ENST00000533110 AACSQ86V21 672 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 ADHFE1Q8IWW8 467 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 SSH3Q8TE77 659 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 DNAJC2Q99543 621 aaKnown RBP11.04□□□□□ -0.64
CTSB-227ENST00000533110 RAD9AQ99638 391 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 VTA1Q9NP79 307 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 A1CFQ9NQ94 594 aaKnown RBP11.04□□□□□ -0.64
CTSB-227ENST00000533110 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 RNF146Q9NTX7 359 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
CTSB-227ENST00000533110 CACNA1AO00555 2505 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 MCM3APO60318 1980 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 LINC01553A4QN01 128 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 GOLIM4O00461 696 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
CTSB-227ENST00000533110 PRKAB2O43741 272 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 GFRA3O60609 400 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 BCAR3O75815 825 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 GJB5O95377 273 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 FDX1P10109 184 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 DUSP28Q4G0W2 176 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 PRSS33Q8NF86 280 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 POP1Q99575 1024 aaKnown RBP11.03□□□□□ -0.64
CTSB-227ENST00000533110 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
CTSB-227ENST00000533110 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.64
CTSB-227ENST00000533110 TCRBV5S4A2TA0A5A2 114 aa11.02□□□□□ -0.65
CTSB-227ENST00000533110 TRIM27P14373 513 aa11.02□□□□□ -0.65
CTSB-227ENST00000533110 RARSP54136 660 aaKnown RBP11.02□□□□□ -0.65
CTSB-227ENST00000533110 DEFB103AP81534 67 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms