RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 CCDC174Q6PII3 467 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 POTEEQ6S8J3 1075 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
NXF1-214ENST00000533048 FOXD4L4Q8WXT5 416 aaPredicted RBP16.97■□□□□ 0.31
NXF1-214ENST00000533048 CUL5Q93034 780 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 MAF1Q9H063 256 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 CCPG1Q9ULG6 757 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 TCHHQ07283 1943 aa16.97■□□□□ 0.31
NXF1-214ENST00000533048 PIK3CDO00329 1044 aa16.96■□□□□ 0.31
NXF1-214ENST00000533048 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
NXF1-214ENST00000533048 OSBPP22059 807 aa16.96■□□□□ 0.31
NXF1-214ENST00000533048 MRPL12P52815 198 aaKnown RBP16.96■□□□□ 0.31
NXF1-214ENST00000533048 USH1GQ495M9 461 aa16.96■□□□□ 0.31
NXF1-214ENST00000533048 REXO1Q8N1G1 1221 aaKnown RBP16.96■□□□□ 0.31
NXF1-214ENST00000533048 AGBL1Q96MI9 1066 aa16.96■□□□□ 0.31
NXF1-214ENST00000533048 TEX13BQ9BXU2 312 aa16.96■□□□□ 0.31
NXF1-214ENST00000533048 PSTPIP2Q9H939 334 aa16.96■□□□□ 0.31
NXF1-214ENST00000533048 ABT1Q9ULW3 272 aaKnown RBP16.96■□□□□ 0.31
NXF1-214ENST00000533048 MRPL11Q9Y3B7 192 aaKnown RBP16.96■□□□□ 0.31
NXF1-214ENST00000533048 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 APLP1P51693 650 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 GNL2Q13823 731 aaKnown RBP16.95■□□□□ 0.3
NXF1-214ENST00000533048 TMEM132BQ14DG7 1078 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 TKFCQ3LXA3 575 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 MCTP2Q6DN12 878 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 SAMD3Q8N6K7 520 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 P2RX7Q99572 595 aaKnown RBP16.95■□□□□ 0.3
NXF1-214ENST00000533048 PTPN18Q99952 460 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
NXF1-214ENST00000533048 PCDHA6Q9UN73 950 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 PCDHA8Q9Y5H6 950 aa16.95■□□□□ 0.3
NXF1-214ENST00000533048 PDHXO00330 501 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 MEIS2O14770 477 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
NXF1-214ENST00000533048 INHBEP58166 350 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
NXF1-214ENST00000533048 RILPL1Q5EBL4 403 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
NXF1-214ENST00000533048 KRT25Q7Z3Z0 450 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 FAM43AQ8N2R8 423 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 CLEC4DQ8WXI8 215 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 GBP4Q96PP9 640 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 RABGAP1Q9Y3P9 1069 aa16.94■□□□□ 0.3
NXF1-214ENST00000533048 CTDP1Q9Y5B0 961 aaPredicted RBP16.94■□□□□ 0.3
NXF1-214ENST00000533048 CNMDO75829 334 aa16.93■□□□□ 0.3
NXF1-214ENST00000533048 TAL1P17542 331 aaPredicted RBP16.93■□□□□ 0.3
NXF1-214ENST00000533048 TRAPPC10P48553 1259 aa16.93■□□□□ 0.3
NXF1-214ENST00000533048 HSD17B4P51659 736 aa16.93■□□□□ 0.3
NXF1-214ENST00000533048 DNM1Q05193 864 aaKnown RBP16.93■□□□□ 0.3
NXF1-214ENST00000533048 AP3B2Q13367 1082 aa16.93■□□□□ 0.3
NXF1-214ENST00000533048 EARS2Q5JPH6 523 aaKnown RBP16.93■□□□□ 0.3
NXF1-214ENST00000533048 FAM173BQ6P4H8 233 aa16.93■□□□□ 0.3
NXF1-214ENST00000533048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.93■□□□□ 0.3
NXF1-214ENST00000533048 CPXCR1Q8N123 301 aa16.93■□□□□ 0.3
NXF1-214ENST00000533048 MAP3K20Q9NYL2 800 aaKnown RBP16.93■□□□□ 0.3
NXF1-214ENST00000533048 BTBD7Q9P203 1132 aa16.93■□□□□ 0.3
NXF1-214ENST00000533048 STAT3P40763 770 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 GCLCP48506 637 aaPredicted RBP16.92■□□□□ 0.3
NXF1-214ENST00000533048 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
NXF1-214ENST00000533048 KRT85P78386 507 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 SREBF2Q12772 1141 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 SNRNP48Q6IEG0 339 aaKnown RBP16.92■□□□□ 0.3
NXF1-214ENST00000533048 MCF2L2Q86YR7 1114 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 RIOX2Q8IUF8 465 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
NXF1-214ENST00000533048 PARK7Q99497 189 aaKnown RBP16.92■□□□□ 0.3
NXF1-214ENST00000533048 POLR3EQ9NVU0 708 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 RBPJLQ9UBG7 517 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 ADGRA2Q96PE1 1338 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
NXF1-214ENST00000533048 CCDC194A0A1B0GVG4 234 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 FAM205CA6NFA0 338 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 IGF2BP3O00425 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
NXF1-214ENST00000533048 NFIBO00712 420 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 FOSP01100 380 aaPredicted RBP16.91■□□□□ 0.3
NXF1-214ENST00000533048 ALAS1P13196 640 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 COPB2P35606 906 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
NXF1-214ENST00000533048 NOM1Q5C9Z4 860 aaKnown RBP16.91■□□□□ 0.3
NXF1-214ENST00000533048 MUM1L1Q5H9M0 696 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 CHST13Q8NET6 341 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 CHAMP1Q96JM3 812 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 SPATC1LQ9H0A9 340 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 RNF146Q9NTX7 359 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 MORF4L1Q9UBU8 362 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 CFAP45Q9UL16 551 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 RIPK3Q9Y572 518 aa16.91■□□□□ 0.3
NXF1-214ENST00000533048 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
NXF1-214ENST00000533048 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
NXF1-214ENST00000533048 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
NXF1-214ENST00000533048 POLR2MP0CAP2 368 aa16.9■□□□□ 0.3
NXF1-214ENST00000533048 CYP2C8P10632 490 aa16.9■□□□□ 0.3
NXF1-214ENST00000533048 TM4SF4P48230 202 aa16.9■□□□□ 0.3
NXF1-214ENST00000533048 NOGQ13253 232 aa16.9■□□□□ 0.3
NXF1-214ENST00000533048 NONOQ15233 471 aaKnown RBP eCLIP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms