RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TET3O43151 1660 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 USP17L5A8MUK1 530 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 TBC1D10BQ4KMP7 808 aaPredicted RBP11.8□□□□□ -0.52
COLCA1-203ENST00000532918 MIGA2Q7L4E1 593 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 RNF168Q8IYW5 571 aaPredicted RBP11.8□□□□□ -0.52
COLCA1-203ENST00000532918 BBS5Q8N3I7 341 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 HAUS1Q96CS2 278 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 TRIM7Q9C029 511 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 CUEDC2Q9H467 287 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 A0A0D9SFI3 127 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 HSPA1LP34931 641 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 GEN1Q17RS7 908 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 LGSNQ5TDP6 509 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 PRPF31Q8WWY3 499 aaKnown RBP11.79□□□□□ -0.52
COLCA1-203ENST00000532918 EDC3Q96F86 508 aaKnown RBP11.79□□□□□ -0.52
COLCA1-203ENST00000532918 USTQ9Y2C2 406 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 PRDM15P57071 1507 aaPredicted RBP11.79□□□□□ -0.52
COLCA1-203ENST00000532918 CCDC25Q86WR0 208 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 DCAF4Q8WV16 495 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 RNF26Q9BY78 433 aaPredicted RBP11.79□□□□□ -0.52
COLCA1-203ENST00000532918 STAM2O75886 525 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 ZBTB16Q05516 673 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
COLCA1-203ENST00000532918 GPKOWQ92917 476 aaPredicted RBP eCLIP11.79□□□□□ -0.52
COLCA1-203ENST00000532918 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 IFT122Q9HBG6 1241 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 TSKSQ9UJT2 592 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 SERPINA10Q9UK55 444 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 PCDHA4Q9UN74 947 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 ZNF233A6NK53 670 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 KRT10P13645 584 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 STAT1P42224 750 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 BPIFB4P59827 614 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 KCTD1Q719H9 257 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 ARFGAP2Q8N6H7 521 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 RDH13Q8NBN7 331 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 NLRP7Q8WX94 980 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 FEZ2Q9UHY8 353 aaPredicted RBP11.79□□□□□ -0.52
COLCA1-203ENST00000532918 ANAPC4Q9UJX5 808 aa11.79□□□□□ -0.52
COLCA1-203ENST00000532918 GOLGA8CPA6NN73 597 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ELF1P32519 619 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 CUL4BQ13620 913 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 USP17L2Q6R6M4 530 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 FASTKD5Q7L8L6 764 aaKnown RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 APOL6Q9BWW8 343 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ARFGAP3Q9NP61 516 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 LZTFL1Q9NQ48 299 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ARMCX3Q9UH62 379 aaPredicted RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 KCNH4Q9UQ05 1017 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 INO80B-WBP1J3KQ70 363 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 DYNLL1P63167 89 aaKnown RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 KRT81Q14533 505 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 POMGNT1Q8WZA1 660 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 AK8Q96MA6 479 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 INO80BQ9C086 356 aaPredicted RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ANKFY1Q9P2R3 1169 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 VIMP08670 466 aaKnown RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 FDX1P10109 184 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 RFC1P35251 1148 aaPredicted RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 LACTBP83111 547 aaPredicted RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 SURF1Q15526 300 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 CROCCP2Q86T23 111 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 TMTC1Q8IUR5 882 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 CAPZA3Q96KX2 299 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 SNX25Q9H3E2 840 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 CACYBPQ9HB71 228 aaKnown RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ADCY9O60503 1353 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 PPP1R2P3Q6NXS1 205 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 FAM167AQ96KS9 214 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ADCY10Q96PN6 1610 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 MYL3P08590 195 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 MECOMQ03112 1051 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 ARHGAP44Q17R89 818 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 WRNIP1Q96S55 665 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 DBNLQ9UJU6 430 aaKnown RBP11.78□□□□□ -0.52
COLCA1-203ENST00000532918 FEM1BQ9UK73 627 aa11.78□□□□□ -0.52
COLCA1-203ENST00000532918 EBAG9O00559 213 aa11.77□□□□□ -0.52
COLCA1-203ENST00000532918 CYP27B1O15528 508 aa11.77□□□□□ -0.52
COLCA1-203ENST00000532918 PDE6CP51160 858 aa11.77□□□□□ -0.52
COLCA1-203ENST00000532918 SLC16A10Q8TF71 515 aa11.77□□□□□ -0.52
COLCA1-203ENST00000532918 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 HNRNPDLO14979 420 aaKnown RBP11.77□□□□□ -0.53
COLCA1-203ENST00000532918 XPAP23025 273 aaPredicted RBP11.77□□□□□ -0.53
COLCA1-203ENST00000532918 PSMC4P43686 418 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 TERF1P54274 439 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 PPP2R3AQ06190 1150 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 ERCC6LQ2NKX8 1250 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 MUM1L1Q5H9M0 696 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 TCP11Q8WWU5 503 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 SLF1Q9BQI6 1058 aa11.77□□□□□ -0.53
COLCA1-203ENST00000532918 UTP11Q9Y3A2 253 aaKnown RBP11.77□□□□□ -0.53
COLCA1-203ENST00000532918 H7C1W4 665 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms