RNA–Protein interactions for RNA: ENST00000532776.5

RELA-218, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-218ENST00000532776 RNPC3Q96LT9 517 aaKnown RBP18.99■□□□□ 0.63
RELA-218ENST00000532776 TCP11L1Q9NUJ3 509 aa18.99■□□□□ 0.63
RELA-218ENST00000532776 CYP39A1Q9NYL5 469 aa18.99■□□□□ 0.63
RELA-218ENST00000532776 GNEQ9Y223 722 aaKnown RBP18.99■□□□□ 0.63
RELA-218ENST00000532776 A0A0U1RQG5 324 aaPredicted RBP18.98■□□□□ 0.63
RELA-218ENST00000532776 ARVCFO00192 962 aa18.98■□□□□ 0.63
RELA-218ENST00000532776 ICAM1P05362 532 aa18.98■□□□□ 0.63
RELA-218ENST00000532776 HSPD1P10809 573 aaKnown RBP18.98■□□□□ 0.63
RELA-218ENST00000532776 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
RELA-218ENST00000532776 CDX2Q99626 313 aaPredicted RBP18.98■□□□□ 0.63
RELA-218ENST00000532776 RANBP17Q9H2T7 1088 aaKnown RBP18.98■□□□□ 0.63
RELA-218ENST00000532776 TTYH1Q9H313 450 aaPredicted RBP18.98■□□□□ 0.63
RELA-218ENST00000532776 TOP1P11387 765 aaKnown RBP18.97■□□□□ 0.63
RELA-218ENST00000532776 NMIQ13287 307 aaPredicted RBP18.97■□□□□ 0.63
RELA-218ENST00000532776 CCDC96Q2M329 555 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 MFSD5Q6N075 450 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 ZNF589Q86UQ0 364 aaPredicted RBP18.97■□□□□ 0.63
RELA-218ENST00000532776 FAM126BQ8IXS8 530 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 MORC4Q8TE76 937 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 TMEM47Q9BQJ4 181 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 CCPG1Q9ULG6 757 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 MTMR7Q9Y216 660 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 DDX49Q9Y6V7 483 aaKnown RBP18.97■□□□□ 0.63
RELA-218ENST00000532776 EYSQ5T1H1 3165 aa18.97■□□□□ 0.63
RELA-218ENST00000532776 SLC16A2P36021 539 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 BEX3Q00994 111 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 RRP12Q5JTH9 1297 aaKnown RBP18.96■□□□□ 0.63
RELA-218ENST00000532776 TAPT1Q6NXT6 567 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 SMC5Q8IY18 1101 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 SLC43A3Q8NBI5 491 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 VTI1AQ96AJ9 217 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 LNPKQ9C0E8 428 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 PDGFCQ9NRA1 345 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 TOMM22Q9NS69 142 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 CCDC171Q6TFL3 1326 aa18.96■□□□□ 0.63
RELA-218ENST00000532776 LAMA4Q16363 1823 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 CDH23Q9H251 3354 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 TMEM265A0A087WTH1 108 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 CD4P01730 458 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 SMPD1P17405 629 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 AAMPQ13685 434 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 SYDE2Q5VT97 1194 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 IQSEC1Q6DN90 963 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 NSMFQ6X4W1 530 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 NOL8Q76FK4 1167 aaKnown RBP18.95■□□□□ 0.62
RELA-218ENST00000532776 C16orf59Q7L2K0 433 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 TLK2Q86UE8 772 aa18.95■□□□□ 0.62
RELA-218ENST00000532776 PURBQ96QR8 312 aaKnown RBP18.95■□□□□ 0.62
RELA-218ENST00000532776 CABYRO75952 493 aa18.94■□□□□ 0.62
RELA-218ENST00000532776 PDHBP11177 359 aa18.94■□□□□ 0.62
RELA-218ENST00000532776 PCP11498 1178 aaKnown RBP18.94■□□□□ 0.62
RELA-218ENST00000532776 PTGS1P23219 599 aa18.94■□□□□ 0.62
RELA-218ENST00000532776 FSCN1Q16658 493 aaKnown RBP18.94■□□□□ 0.62
RELA-218ENST00000532776 CXCL17Q6UXB2 119 aa18.94■□□□□ 0.62
RELA-218ENST00000532776 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.94■□□□□ 0.62
RELA-218ENST00000532776 FBXO16Q8IX29 292 aaPredicted RBP18.94■□□□□ 0.62
RELA-218ENST00000532776 TTC14Q96N46 770 aa18.94■□□□□ 0.62
RELA-218ENST00000532776 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.94■□□□□ 0.622e-9■■□□□ 13.1
RELA-218ENST00000532776 VTA1Q9NP79 307 aa18.94■□□□□ 0.62
RELA-218ENST00000532776 Q9Y3F1 56 aa18.94■□□□□ 0.62
RELA-218ENST00000532776 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.93■□□□□ 0.62
RELA-218ENST00000532776 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.93■□□□□ 0.62
RELA-218ENST00000532776 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 TLR3O15455 904 aaKnown RBP18.93■□□□□ 0.62
RELA-218ENST00000532776 HAND2P61296 217 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 PPIGQ13427 754 aaKnown RBP eCLIP18.93■□□□□ 0.625e-7■■□□□ 13.2
RELA-218ENST00000532776 BAATQ14032 418 aaPredicted RBP18.93■□□□□ 0.62
RELA-218ENST00000532776 AKNAD1Q5T1N1 836 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 TMEM63BQ5T3F8 832 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 EEPD1Q7L9B9 569 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 TBC1D10CQ8IV04 446 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 AP5M1Q9H0R1 490 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 GPCPD1Q9NPB8 672 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 PRUNE2Q8WUY3 3088 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 GRIN2DO15399 1336 aa18.93■□□□□ 0.62
RELA-218ENST00000532776 FRMPD2Q68DX3 1309 aaPredicted RBP18.93■□□□□ 0.62
RELA-218ENST00000532776 LOC102724159A0A0B4J2E5 919 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 NFIBO00712 420 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 DYNC1LI2O43237 492 aaPredicted RBP18.92■□□□□ 0.62
RELA-218ENST00000532776 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 CSF2RAP15509 400 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 SDSP20132 328 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 PWP2Q15269 919 aaKnown RBP18.92■□□□□ 0.62
RELA-218ENST00000532776 TMEM240Q5SV17 173 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 RASIP1Q5U651 963 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 MFSD6Q6ZSS7 791 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 CLEC4DQ8WXI8 215 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 MYLIPQ8WY64 445 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 OSBPL3Q9H4L5 887 aa18.92■□□□□ 0.62
RELA-218ENST00000532776 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
RELA-218ENST00000532776 DNAJB2P25686 324 aa18.91■□□□□ 0.62
RELA-218ENST00000532776 ALDH5A1P51649 535 aaPredicted RBP18.91■□□□□ 0.62
RELA-218ENST00000532776 ZNF543Q08ER8 600 aa18.91■□□□□ 0.62
RELA-218ENST00000532776 ITGA7Q13683 1181 aa18.91■□□□□ 0.62
RELA-218ENST00000532776 PLEKHM2Q8IWE5 1019 aa18.91■□□□□ 0.62
RELA-218ENST00000532776 TMEM199Q8N511 208 aa18.91■□□□□ 0.62
RELA-218ENST00000532776 MAFAQ8NHW3 353 aaPredicted RBP18.91■□□□□ 0.62
RELA-218ENST00000532776 SEZ6LQ9BYH1 1024 aa18.91■□□□□ 0.62
RELA-218ENST00000532776 PPP1R12CQ9BZL4 782 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms