RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 CBX8Q9HC52 389 aa9.62□□□□□ -0.87
CTNND1-232ENST00000532649 IREB2P48200 963 aaKnown RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 STAT2P52630 851 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 PPP2R5DQ14738 602 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 AOC3Q16853 763 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 CCDC94Q9BW85 323 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 SRRTQ9BXP5 876 aaKnown RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 SUGCTQ9HAC7 445 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 NKIRAS1Q9NYS0 192 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 SOS2Q07890 1332 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 SPDYE16A6NNV3 312 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 ECE2O60344 883 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 PRPF6O94906 941 aaKnown RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 ZBTB8OSQ8IWT0 167 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 SPOPO43791 374 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 CACNB3P54284 484 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 RNF169Q8NCN4 708 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 CDHR2Q9BYE9 1310 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 GOLGA6CA6NDK9 693 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 GOLGA6BA6NDN3 693 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 GOLGA6DP0CG33 693 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 STMN1P16949 149 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 CRKP46108 304 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 CYP2J2P51589 502 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 ZFP91Q96JP5 570 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 RNF26Q9BY78 433 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 GOLGA6AQ9NYA3 693 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 RTEL1Q9NZ71 1219 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 ZHX1Q9UKY1 873 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 MTMR6Q9Y217 621 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 IGBP1P78318 339 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 CYP4A11Q02928 519 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 PTGDRQ13258 359 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 GBP7Q8N8V2 638 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 PIGSQ96S52 555 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 IWS1Q96ST2 819 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 ABT1Q9ULW3 272 aaKnown RBP9.61□□□□□ -0.87
CTNND1-232ENST00000532649 ZKSCAN5Q9Y2L8 839 aa9.61□□□□□ -0.87
CTNND1-232ENST00000532649 RIMS1Q86UR5 1692 aaKnown RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 PTPRMP28827 1452 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 K7ENM7 598 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 FMNL1O95466 1100 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 CD19P15391 556 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 CDK8P49336 464 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 GKAP1Q5VSY0 366 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 RASGRP4Q8TDF6 673 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 SH3RF3Q8TEJ3 882 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 HVCN1Q96D96 273 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 PRIMPOLQ96LW4 560 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 NUP58Q9BVL2 599 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 VCXQ9H320 206 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 MGEA5O60502 916 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 IVLP07476 585 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 LIG4P49917 911 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 TBC1D10BQ4KMP7 808 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 USP17L2Q6R6M4 530 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 IRAK4Q9NWZ3 460 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 PCDHA4Q9UN74 947 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 PRDX5P30044 214 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 POLGP54098 1239 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 TNNC1P63316 161 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 NFIXQ14938 502 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 CYP26C1Q6V0L0 522 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 SDCCAG8Q86SQ7 713 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 MYOCDQ8IZQ8 938 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 CLIC6Q96NY7 704 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 CD209Q9NNX6 404 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 PANK4Q9NVE7 773 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 TUBB4AP04350 444 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 LACTBP83111 547 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 NEDD9Q14511 834 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 PSMD6Q15008 389 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 SYDE2Q5VT97 1194 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 FAM160B1Q5W0V3 765 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 SYT10Q6XYQ8 523 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 CPLX4Q7Z7G2 160 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNND1-232ENST00000532649 ZSWIM5Q9P217 1185 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 CPDO75976 1380 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 SPATA31A1Q5TZJ5 1347 aa9.6□□□□□ -0.87
CTNND1-232ENST00000532649 BCRP11274 1271 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 TMCO4Q5TGY1 634 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 LRCH2Q5VUJ6 765 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 SMIM5Q71RC9 77 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 FBXO18Q8NFZ0 1043 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 PI4K2BQ8TCG2 481 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 PGBD1Q96JS3 809 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 HAUS8Q9BT25 410 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 ZNF277Q9NRM2 450 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 LMBRD1Q9NUN5 540 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 MED14O60244 1454 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 AGLP35573 1532 aa9.59□□□□□ -0.87
CTNND1-232ENST00000532649 SH2B2O14492 632 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-232ENST00000532649 SLC12A2P55011 1212 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms