RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RUFY4Q6ZNE9 571 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 KIRREL3Q8IZU9 778 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 TM6SF1Q9BZW5 370 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 SH3BP1Q9Y3L3 701 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 IFIT3O14879 490 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 IDEP14735 1019 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 TM4SF1P30408 202 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 SMTNP53814 917 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 KIF5AQ12840 1032 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 LAMB3Q13751 1172 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 SF3B3Q15393 1217 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 CREB3L3Q68CJ9 461 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 C8orf74Q6P047 294 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 PPFIBP2Q8ND30 876 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 TCHPQ9BT92 498 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 PUS7LQ9H0K6 701 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 ATP6V0A2Q9Y487 856 aa7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 COL14A1Q05707 1796 aaKnown RBP7.52□□□□□ -1.21
TGFBR3-209ENST00000532540 GCOM1H8Y6P7 765 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 CDKL5O76039 1030 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 ZNF202O95125 648 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 ZFYP08048 801 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 MYZAPP0CAP1 466 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 POLA2Q14181 598 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 DPCR1Q3MIW9 517 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 RASIP1Q5U651 963 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 ARMCX6Q7L4S7 300 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 ZNF589Q86UQ0 364 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 KBTBD3Q8NAB2 608 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 ZKSCAN4Q969J2 545 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 TEKT1Q969V4 418 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 MYL10Q9BUA6 226 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 HOMER3Q9NSC5 361 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 L1RE1Q9UN81 338 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 TOPAZ1Q8N9V7 1692 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 hCG_1642624A0A1W2PR95 340 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 ZMYND10O75800 440 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 IFT20Q8IY31 132 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 RTKN2Q8IZC4 609 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 RNF10Q8N5U6 811 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 COG1Q8WTW3 980 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 SLC40A1Q9NP59 571 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 LEMD3Q9Y2U8 911 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 NFE2L3Q9Y4A8 694 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 PCDHAC2Q9Y5I4 1007 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 RPAP1Q9BWH6 1393 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 KLHL33A6NCF5 533 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 B4E1Z4 1266 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 MYCP01106 439 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 CSF1RP07333 972 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 VIMP08670 466 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 MARCKSP29966 332 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 MECOMQ03112 1051 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 PTH1RQ03431 593 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 SPAG1Q07617 926 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 PAK2Q13177 524 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC84Q86UT8 332 aaPredicted RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 SUPT20HQ8NEM7 779 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 DTNBP1Q96EV8 351 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 TRIM7Q9C029 511 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 SUGCTQ9HAC7 445 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 A1CFQ9NQ94 594 aaKnown RBP7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 FANCLQ9NW38 375 aa7.51□□□□□ -1.21
TGFBR3-209ENST00000532540 USP17L3A6NCW0 530 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 USP17L4A6NCW7 530 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 RASSF10A6NK89 507 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 IKBKBO14920 756 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 MARCH6O60337 910 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 RFX5P48382 616 aaPredicted RBP7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 PPARDQ03181 441 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 MAP7Q14244 749 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 HHATQ5VTY9 493 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 DLK2Q6UY11 383 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CYP26C1Q6V0L0 522 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 MFSD6Q6ZSS7 791 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 USP17L1Q7RTZ2 530 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 ARMC9Q7Z3E5 817 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 KLHL23Q8NBE8 558 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 DYNLL2Q96FJ2 89 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 UIMC1Q96RL1 719 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 SELENOSQ9BQE4 189 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 MYO1AQ9UBC5 1043 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 STK38LQ9Y2H1 464 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 PSMD14O00487 310 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CEP104O60308 925 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 HLA-DOAP06340 250 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 USP17L8P0C7I0 530 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 MYBL2P10244 700 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 ATP5JP18859 108 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 NNTQ13423 1086 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 KANK3Q6NY19 840 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 VSTM4Q8IW00 320 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 SLF2Q8IX21 1173 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 SP8Q8IXZ3 490 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 B4GALNT2Q8NHY0 566 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 CCDC26Q8TAB7 109 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 OSBP2Q969R2 916 aa7.5□□□□□ -1.21
TGFBR3-209ENST00000532540 SLF1Q9BQI6 1058 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms