RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.09
COPB1-208ENST00000532088 ADAMTS5Q9UNA0 930 aa14.52□□□□□ -0.09
COPB1-208ENST00000532088 FRMPD2Q68DX3 1309 aaPredicted RBP14.51□□□□□ -0.09
COPB1-208ENST00000532088 PARP14Q460N5 1801 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 C3orf80F5H4A9 247 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 FLOT1O75955 427 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 LARGE1O95461 756 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 RXRAP19793 462 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 CDC27P30260 824 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
COPB1-208ENST00000532088 FUT2Q10981 343 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 CUL4AQ13619 759 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 NTRK3Q16288 839 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 SYDE2Q5VT97 1194 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 MB21D1Q8N884 522 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 TATDN2Q93075 761 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 MTMR8Q96EF0 704 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 PARK7Q99497 189 aaKnown RBP14.51□□□□□ -0.09
COPB1-208ENST00000532088 NUP88Q99567 741 aaPredicted RBP14.51□□□□□ -0.09
COPB1-208ENST00000532088 PTPN18Q99952 460 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 GPCPD1Q9NPB8 672 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 MTMR7Q9Y216 660 aa14.51□□□□□ -0.09
COPB1-208ENST00000532088 STK36Q9NRP7 1315 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 BHMG1C9JSJ3 638 aaPredicted RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 PDHXO00330 501 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 CPLX1O14810 134 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 ADD1P35611 737 aaKnown RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 VEGFBP49765 207 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 CCT2P78371 535 aaKnown RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 BECN1Q14457 450 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 TTBK2Q6IQ55 1244 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 NOL8Q76FK4 1167 aaKnown RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 RASGRP2Q7LDG7 609 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 CCDC144CPQ8IYA2 1237 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 SRBD1Q8N5C6 995 aaKnown RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 INTS4Q96HW7 963 aaKnown RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 CFHR5Q9BXR6 569 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 RNF26Q9BY78 433 aaPredicted RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 ASCC2Q9H1I8 757 aaPredicted RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 RANBP17Q9H2T7 1088 aaKnown RBP14.5□□□□□ -0.09
COPB1-208ENST00000532088 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 RLFQ13129 1914 aa14.5□□□□□ -0.09
COPB1-208ENST00000532088 CNTNAP5Q8WYK1 1306 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 IGF2BP3O00425 579 aaKnown RBP eCLIP14.49□□□□□ -0.09
COPB1-208ENST00000532088 ATP2A1O14983 1001 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 PLEKHA8P1O95397 391 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 OAZ1P54368 228 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 ST3GAL1Q11201 340 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 TRAF1Q13077 416 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 IKQ13123 557 aaPredicted RBP14.49□□□□□ -0.09
COPB1-208ENST00000532088 STK3Q13188 491 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 NUDT18Q6ZVK8 323 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 NBPF11Q86T75 865 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 METTL3Q86U44 580 aaKnown RBP14.49□□□□□ -0.09
COPB1-208ENST00000532088 RAB11FIP4Q86YS3 637 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 FAM177A1Q8N128 213 aaPredicted RBP14.49□□□□□ -0.09
COPB1-208ENST00000532088 FAM43AQ8N2R8 423 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 PXYLP1Q8TE99 480 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 SLC38A10Q9HBR0 1119 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 A0A0G2JMZ2 1700 aa14.49□□□□□ -0.09
COPB1-208ENST00000532088 hCG_1984214I3L0E3 225 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 TRIM66O15016 1216 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 PRPF3O43395 683 aaKnown RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 HRO43593 1189 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 CYTH3O43739 400 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 FMNL1O95466 1100 aaPredicted RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 ANP32AP39687 249 aaKnown RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 GCLCP48506 637 aaPredicted RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 HERVK_113P62684 666 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 HMGN5P82970 282 aaKnown RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 TRIM22Q8IYM9 498 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 ZNF713Q8N859 430 aaPredicted RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 SMARCC2Q8TAQ2 1214 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 KIFC2Q96AC6 838 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 UBA5Q9GZZ9 404 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 JMJD4Q9H9V9 463 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 NCOA5Q9HCD5 579 aaKnown RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 FBXO28Q9NVF7 368 aa14.48□□□□□ -0.09
COPB1-208ENST00000532088 ISY1Q9ULR0 285 aaKnown RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.48□□□□□ -0.09
COPB1-208ENST00000532088 PNMA6FA0A0J9YX94 578 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 VWA5AO00534 786 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 ZBTB5O15062 677 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 AOC2O75106 756 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 ZBED4O75132 1171 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 CTDNEP1O95476 244 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 SLC16A2P36021 539 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 HTRA3P83110 453 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 SSRP1Q08945 709 aaKnown RBP14.47□□□□□ -0.09
COPB1-208ENST00000532088 SLC35G1Q2M3R5 365 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 TEX2Q8IWB9 1127 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 CCDC83Q8IWF9 413 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 NECAB1Q8N987 351 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 RGS22Q8NE09 1264 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 NSUN7Q8NE18 718 aaKnown RBP14.47□□□□□ -0.09
COPB1-208ENST00000532088 REPS2Q8NFH8 660 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 ATG4CQ96DT6 458 aa14.47□□□□□ -0.09
COPB1-208ENST00000532088 RRP36Q96EU6 259 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms