RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 SPC25Q9HBM1 224 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 STARD7Q9NQZ5 370 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 HELLSQ9NRZ9 838 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 ANAPC4Q9UJX5 808 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 MCM3APO60318 1980 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 MCCP23508 829 aa17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 CST5P28325 142 aaPredicted RBP17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 PDE1AP54750 535 aa17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 SHHQ15465 462 aa17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 TKFCQ3LXA3 575 aa17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 TICAM2Q86XR7 235 aa17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 KLHDC9Q8NEP7 349 aa17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 RNF146Q9NTX7 359 aa17.98■□□□□ 0.47
DEPDC7-204ENST00000532078 DCDC2CA8MYV0 355 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 ORC4O43929 436 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 RANBP6O60518 1105 aaKnown RBP17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 C6orf222P0C671 652 aaPredicted RBP17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 RAG1P15918 1043 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 ALX1Q15699 326 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 KCNA10Q16322 511 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 C9orf50Q5SZB4 431 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 PCSK9Q8NBP7 692 aaKnown RBP17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 TOX2Q96NM4 488 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 A1CFQ9NQ94 594 aaKnown RBP17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 IL17RBQ9NRM6 502 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 ZNF536O15090 1300 aa17.97■□□□□ 0.47
DEPDC7-204ENST00000532078 LRRC37A2A6NM11 1700 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 NMT2O60551 498 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 CNTN2Q02246 1040 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 ZNF697Q5TEC3 545 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 CCSAPQ6IQ19 270 aaPredicted RBP17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 KCTD1Q719H9 257 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 FAM133AQ8N9E0 248 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 CHMP4CQ96CF2 233 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 AGBL1Q96MI9 1066 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 UPF3AQ9H1J1 476 aaKnown RBP17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 CUL9Q8IWT3 2517 aa17.96■□□□□ 0.47
DEPDC7-204ENST00000532078 ELP1O95163 1332 aa17.96■□□□□ 0.46
DEPDC7-204ENST00000532078 ZMYM6O95789 1325 aa17.96■□□□□ 0.46
DEPDC7-204ENST00000532078 MROH7Q68CQ1 1323 aa17.96■□□□□ 0.46
DEPDC7-204ENST00000532078 MYADML2A6NDP7 307 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 ADCY6O43306 1168 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 ALAS1P13196 640 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 GJA9P57773 515 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 AAMPQ13685 434 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 CCDC96Q2M329 555 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 MCMDC2Q4G0Z9 681 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 DCAF4Q8WV16 495 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 TRERF1Q96PN7 1200 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 INCENPQ9NQS7 918 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 GPHNQ9NQX3 736 aaPredicted RBP17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 TOMM22Q9NS69 142 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 PRR12Q9ULL5 1215 aa17.95■□□□□ 0.46
DEPDC7-204ENST00000532078 A0A0D9SFI3 127 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 ASB14A6NK59 587 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 FGRP09769 529 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 ITGB8P26012 769 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 NOVP48745 357 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 FPGSQ05932 587 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 FAAP100Q0VG06 881 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 CCDC174Q6PII3 467 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 FAM227BQ96M60 508 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 GUCD1Q96NT3 240 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 KATNBL1Q9H079 304 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 MTMR7Q9Y216 660 aa17.94■□□□□ 0.46
DEPDC7-204ENST00000532078 ASGR1P07306 291 aa17.93■□□□□ 0.46
DEPDC7-204ENST00000532078 GNASQ5JWF2 1037 aa17.93■□□□□ 0.46
DEPDC7-204ENST00000532078 RASGRP2Q7LDG7 609 aa17.93■□□□□ 0.46
DEPDC7-204ENST00000532078 RNPC3Q96LT9 517 aaKnown RBP17.93■□□□□ 0.46
DEPDC7-204ENST00000532078 FAM161BQ96MY7 647 aa17.93■□□□□ 0.46
DEPDC7-204ENST00000532078 CCPG1Q9ULG6 757 aa17.93■□□□□ 0.46
DEPDC7-204ENST00000532078 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 SOWAHBA6NEL2 793 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 DLL1O00548 723 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 FGAP02671 866 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 ICAM1P05362 532 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 TOP1P11387 765 aaKnown RBP17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 HOXB3P14651 431 aaPredicted RBP17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 SNAP25P60880 206 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 TNFAIP2Q03169 654 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 RRP12Q5JTH9 1297 aaKnown RBP17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 NOL8Q76FK4 1167 aaKnown RBP17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 VTI1AQ96AJ9 217 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 CYP39A1Q9NYL5 469 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 CCDC171Q6TFL3 1326 aa17.92■□□□□ 0.46
DEPDC7-204ENST00000532078 UNC80Q8N2C7 3258 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 ST18O60284 1047 aa17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 HSPD1P10809 573 aaKnown RBP17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 PCP11498 1178 aaKnown RBP17.91■□□□□ 0.46
DEPDC7-204ENST00000532078 MFAP1P55081 439 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms