RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 DYNC1LI2O43237 492 aaPredicted RBP9.36□□□□□ -0.91
NXF1-212ENST00000531872 LPXNO60711 386 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 SMPD1P17405 629 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 PTGS1P23219 599 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 SLC4A3P48751 1232 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 PSMC6P62333 389 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 GRB10Q13322 594 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 ZKSCAN2Q63HK3 967 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 CEP85Q6P2H3 762 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 ARNTL2Q8WYA1 636 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
NXF1-212ENST00000531872 AP5M1Q9H0R1 490 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 IL1RAPL2Q9NP60 686 aa9.36□□□□□ -0.91
NXF1-212ENST00000531872 IGKV6D-41A0A0C4DH26 115 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
NXF1-212ENST00000531872 SUPT20HL2P0C7V6 817 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 FDX1P10109 184 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 ACTN1P12814 892 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 RASA1P20936 1047 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 RFC2P35250 354 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 UBE3CQ15386 1083 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 IQSEC1Q6DN90 963 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 TAPT1Q6NXT6 567 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 NOL8Q76FK4 1167 aaKnown RBP9.35□□□□□ -0.91
NXF1-212ENST00000531872 DEFB128Q7Z7B8 93 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 HERC6Q8IVU3 1022 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 RHPN1Q8TCX5 695 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 MKL1Q969V6 931 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 DDRGK1Q96HY6 314 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 ACAD9Q9H845 621 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 A1CFQ9NQ94 594 aaKnown RBP9.35□□□□□ -0.91
NXF1-212ENST00000531872 TRMT13Q9NUP7 481 aaKnown RBP9.35□□□□□ -0.91
NXF1-212ENST00000531872 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 FEM1BQ9UK73 627 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 CTDP1Q9Y5B0 961 aaPredicted RBP9.35□□□□□ -0.91
NXF1-212ENST00000531872 WDFY4Q6ZS81 3184 aa9.35□□□□□ -0.91
NXF1-212ENST00000531872 SCN5AQ14524 2016 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 TNKSO95271 1327 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 CHGBP05060 677 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 CYP2C9P11712 490 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 SBK1Q52WX2 424 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 HSP90AB4PQ58FF6 505 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 PDGFCQ9NRA1 345 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 PAG1Q9NWQ8 432 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 ARPP21Q9UBL0 812 aaPredicted RBP9.34□□□□□ -0.91
NXF1-212ENST00000531872 CLIP2Q9UDT6 1046 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 SYNPO2Q9UMS6 1093 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 SLC4A4Q9Y6R1 1079 aa9.34□□□□□ -0.91
NXF1-212ENST00000531872 ZNF536O15090 1300 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.33□□□□□ -0.92
NXF1-212ENST00000531872 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 IQCF3P0C7M6 154 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 MRE11P49959 708 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 TKFCQ3LXA3 575 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 FBXO16Q8IX29 292 aaPredicted RBP9.33□□□□□ -0.92
NXF1-212ENST00000531872 FAM178BQ8IXR5 827 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 RPAP2Q8IXW5 612 aaPredicted RBP9.33□□□□□ -0.92
NXF1-212ENST00000531872 CLASRPQ8N2M8 674 aaKnown RBP9.33□□□□□ -0.92
NXF1-212ENST00000531872 GMCL1P1Q8NEA9 526 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 MORC4Q8TE76 937 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.33□□□□□ -0.92
NXF1-212ENST00000531872 PUS7LQ9H0K6 701 aaKnown RBP9.33□□□□□ -0.92
NXF1-212ENST00000531872 MKNK2Q9HBH9 465 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 VTA1Q9NP79 307 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 HOMER2Q9NSB8 354 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 RNF146Q9NTX7 359 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
NXF1-212ENST00000531872 DDX49Q9Y6V7 483 aaKnown RBP9.33□□□□□ -0.92
NXF1-212ENST00000531872 COL4A4P53420 1690 aaPredicted RBP9.32□□□□□ -0.92
NXF1-212ENST00000531872 TET1Q8NFU7 2136 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 BAIAP3O94812 1187 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 IFIT2P09913 472 aaKnown RBP9.32□□□□□ -0.92
NXF1-212ENST00000531872 RLBP1P12271 317 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 BMP3P12645 472 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 ATP5JP18859 108 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 PURAQ00577 322 aaKnown RBP9.32□□□□□ -0.92
NXF1-212ENST00000531872 DUSP28Q4G0W2 176 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 KIAA1211Q6ZU35 1233 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 ITPRIPQ8IWB1 547 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 GJD3Q8N144 294 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 KIF1BPQ96EK5 621 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 CEP95Q96GE4 821 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 TRERF1Q96PN7 1200 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 BOLA2Q9H3K6 86 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 UBE2ZQ9H832 354 aaPredicted RBP9.32□□□□□ -0.92
NXF1-212ENST00000531872 MTMR4Q9NYA4 1195 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 MYH4Q9Y623 1939 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 TANC1Q9C0D5 1861 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 SCN10AQ9Y5Y9 1956 aa9.32□□□□□ -0.92
NXF1-212ENST00000531872 PTPRSQ13332 1948 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 LCHNA4D1U4 455 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 GSG1L2A8MUP6 293 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 TMEM232C9JQI7 657 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 TTLL1O95922 423 aa9.31□□□□□ -0.92
NXF1-212ENST00000531872 STAT2P52630 851 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms