RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LIPIQ6XZB0 460 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 HS2ST1Q7LGA3 356 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 FNIP1Q8TF40 1166 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 DHRS1Q96LJ7 313 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 SPATA25Q9BR10 227 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 USP40Q9NVE5 1235 aa8.28□□□□□ -1.08
PTPRK-220ENST00000531466 SRGAP3O43295 1099 aa8.27□□□□□ -1.09
PTPRK-220ENST00000531466 NT5DC1Q5TFE4 455 aa8.27□□□□□ -1.09
PTPRK-220ENST00000531466 FERMT3Q86UX7 667 aa8.27□□□□□ -1.09
PTPRK-220ENST00000531466 SLITRK4Q8IW52 837 aa8.27□□□□□ -1.09
PTPRK-220ENST00000531466 BRF1Q92994 677 aa8.27□□□□□ -1.09
PTPRK-220ENST00000531466 TMPRSS5Q9H3S3 457 aa8.27□□□□□ -1.09
PTPRK-220ENST00000531466 PMF1-BGLAPU3KQ54 211 aa8.27□□□□□ -1.09
PTPRK-220ENST00000531466 FGF10O15520 208 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-220ENST00000531466 INSRRP14616 1297 aa8.26□□□□□ -1.09
PTPRK-220ENST00000531466 PRR5P85299 388 aa8.26□□□□□ -1.09
PTPRK-220ENST00000531466 UBXN11Q5T124 520 aa8.26□□□□□ -1.09
PTPRK-220ENST00000531466 DCAF15Q66K64 600 aa8.26□□□□□ -1.09
PTPRK-220ENST00000531466 PDLIM7Q9NR12 457 aa8.26□□□□□ -1.09
PTPRK-220ENST00000531466 FAN1Q9Y2M0 1017 aa8.26□□□□□ -1.09
PTPRK-220ENST00000531466 F8W031 263 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-220ENST00000531466 MC3RP41968 323 aa8.25□□□□□ -1.09
PTPRK-220ENST00000531466 PMS1P54277 932 aaKnown RBP8.25□□□□□ -1.09
PTPRK-220ENST00000531466 ZNF445P59923 1031 aa8.25□□□□□ -1.09
PTPRK-220ENST00000531466 NOL9Q5SY16 702 aaKnown RBP8.25□□□□□ -1.09
PTPRK-220ENST00000531466 HHIPL2Q6UWX4 724 aa8.25□□□□□ -1.09
PTPRK-220ENST00000531466 CYP2R1Q6VVX0 501 aa8.25□□□□□ -1.09
PTPRK-220ENST00000531466 PPFIBP1Q86W92 1011 aa8.25□□□□□ -1.09
PTPRK-220ENST00000531466 ZNF526Q8TF50 670 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-220ENST00000531466 FAM86C1Q9NVL1 165 aa8.25□□□□□ -1.09
PTPRK-220ENST00000531466 DBR1Q9UK59 544 aaKnown RBP8.25□□□□□ -1.09
PTPRK-220ENST00000531466 K7ESM1 405 aa8.24□□□□□ -1.09
PTPRK-220ENST00000531466 PUM1Q14671 1186 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPRK-220ENST00000531466 ZFYVE27Q5T4F4 411 aa8.24□□□□□ -1.09
PTPRK-220ENST00000531466 NT5C1AQ9BXI3 368 aa8.24□□□□□ -1.09
PTPRK-220ENST00000531466 SRRTQ9BXP5 876 aaKnown RBP8.24□□□□□ -1.09
PTPRK-220ENST00000531466 TP53P04637 393 aaPredicted RBP8.23□□□□□ -1.09
PTPRK-220ENST00000531466 AXDND1Q5T1B0 1012 aaPredicted RBP8.23□□□□□ -1.09
PTPRK-220ENST00000531466 INTS3Q68E01 1043 aaKnown RBP8.23□□□□□ -1.09
PTPRK-220ENST00000531466 SAPCD2Q86UD0 394 aa8.23□□□□□ -1.09
PTPRK-220ENST00000531466 FIBCD1Q8N539 461 aa8.23□□□□□ -1.09
PTPRK-220ENST00000531466 PTCHD1Q96NR3 888 aa8.23□□□□□ -1.09
PTPRK-220ENST00000531466 RXFP1Q9HBX9 757 aa8.23□□□□□ -1.09
PTPRK-220ENST00000531466 GP6Q9HCN6 339 aa8.23□□□□□ -1.09
PTPRK-220ENST00000531466 ASGR2P07307 311 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 IFNGR1P15260 489 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 HTRA3P83110 453 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 USP48Q86UV5 1035 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 DDX1Q92499 740 aaKnown RBP8.22□□□□□ -1.09
PTPRK-220ENST00000531466 FCRL3Q96P31 734 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-220ENST00000531466 RNF38Q9H0F5 515 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 BCAS3Q9H6U6 928 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 ZNRF3Q9ULT6 936 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 FHOD1Q9Y613 1164 aa8.22□□□□□ -1.09
PTPRK-220ENST00000531466 SH3D21A4FU49 640 aa8.21□□□□□ -1.1
PTPRK-220ENST00000531466 CD3EP07766 207 aa8.21□□□□□ -1.1
PTPRK-220ENST00000531466 NOP2P46087 812 aaKnown RBP8.21□□□□□ -1.1
PTPRK-220ENST00000531466 ALG3Q92685 438 aa8.21□□□□□ -1.1
PTPRK-220ENST00000531466 GPR20Q99678 358 aa8.21□□□□□ -1.1
PTPRK-220ENST00000531466 NCAM1P13591 858 aa8.2□□□□□ -1.1
PTPRK-220ENST00000531466 CORO7P57737 925 aa8.2□□□□□ -1.1
PTPRK-220ENST00000531466 DLX2Q07687 328 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-220ENST00000531466 SMARCC1Q92922 1105 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-220ENST00000531466 ZDHHC15Q96MV8 337 aa8.2□□□□□ -1.1
PTPRK-220ENST00000531466 SPON2Q9BUD6 331 aa8.2□□□□□ -1.1
PTPRK-220ENST00000531466 NOL6Q9H6R4 1146 aaKnown RBP8.2□□□□□ -1.1
PTPRK-220ENST00000531466 ZNF451Q9Y4E5 1061 aa8.2□□□□□ -1.1
PTPRK-220ENST00000531466 DUSP10Q9Y6W6 482 aa8.2□□□□□ -1.1
PTPRK-220ENST00000531466 TBC1D8O95759 1140 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 ERCC3P19447 782 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 L1CAMP32004 1257 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 CNR2P34972 360 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 MRPL58Q14197 206 aaKnown RBP8.19□□□□□ -1.1
PTPRK-220ENST00000531466 ZYXQ15942 572 aaKnown RBP8.19□□□□□ -1.1
PTPRK-220ENST00000531466 ZNF827Q17R98 1081 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 ANKRD39Q53RE8 183 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 B3GNT8Q7Z7M8 397 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 PALD1Q9ULE6 856 aa8.19□□□□□ -1.1
PTPRK-220ENST00000531466 SF3B6Q9Y3B4 125 aaKnown RBP8.19□□□□□ -1.1
PTPRK-220ENST00000531466 GLI4P10075 376 aa8.18□□□□□ -1.1
PTPRK-220ENST00000531466 CD247P20963 164 aa8.18□□□□□ -1.1
PTPRK-220ENST00000531466 PMLP29590 882 aa8.18□□□□□ -1.1
PTPRK-220ENST00000531466 CARFQ8N187 725 aa8.18□□□□□ -1.1
PTPRK-220ENST00000531466 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
PTPRK-220ENST00000531466 FERD3LQ96RJ6 166 aa8.18□□□□□ -1.1
PTPRK-220ENST00000531466 CNOT11Q9UKZ1 510 aaKnown RBP8.18□□□□□ -1.1
PTPRK-220ENST00000531466 NOBOXO60393 691 aa8.17□□□□□ -1.1
PTPRK-220ENST00000531466 ITGA4P13612 1032 aa8.17□□□□□ -1.1
PTPRK-220ENST00000531466 FBXW10Q5XX13 1052 aa8.17□□□□□ -1.1
PTPRK-220ENST00000531466 RUFY4Q6ZNE9 571 aa8.17□□□□□ -1.1
PTPRK-220ENST00000531466 TAB3Q8N5C8 712 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-220ENST00000531466 BCL2L13Q9BXK5 485 aa8.17□□□□□ -1.1
PTPRK-220ENST00000531466 MYRFQ9Y2G1 1151 aa8.17□□□□□ -1.1
PTPRK-220ENST00000531466 IMPDH2P12268 514 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 GJA9P57773 515 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 POU4F1Q01851 419 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 PPP2R5DQ14738 602 aa8.16□□□□□ -1.1
PTPRK-220ENST00000531466 CCDC27Q2M243 656 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms