RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 BUB1O43683 1085 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 LTKP29376 864 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 POLR2FP61218 127 aaKnown RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 FAM178BQ8IXR5 827 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 CACYBPQ9HB71 228 aaKnown RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 RIC8AQ9NPQ8 531 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 TMEM63CQ9P1W3 806 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ARMCX3Q9UH62 379 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 TACC3Q9Y6A5 838 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 PRDM15P57071 1507 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ABCB4P21439 1286 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 CTNNA1P35221 906 aaKnown RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 NDUFA8P51970 172 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 MFAP3P55082 362 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ADAM9Q13443 819 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 BBOF1Q8ND07 529 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 THRAP3Q9Y2W1 955 aaKnown RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 NOC2LQ9Y3T9 749 aaKnown RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 USP6P35125 1406 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ADCY10Q96PN6 1610 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TTLL1O95922 423 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 GAP43P17677 238 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ADORA1P30542 326 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ADCY8P40145 1251 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 SCYL2Q6P3W7 929 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ANKRD35Q8N283 1001 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 PPP4R1Q8TF05 950 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 RAB3IPQ96QF0 476 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 SEPT10Q9P0V9 454 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ANKARQ7Z5J8 1434 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 WDR17Q8IZU2 1322 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 RGS16O15492 202 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 PDE8BO95263 885 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TROVE2P10155 538 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 VSIG1Q86XK7 387 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TSC1Q92574 1164 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 CLIC6Q96NY7 704 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 SLC39A2Q9NP94 309 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 COPRSQ9NQ92 184 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 RTEL1Q9NZ71 1219 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TTLL3Q9Y4R7 772 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TARBP1Q13395 1621 aaKnown RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 CASQ2O14958 399 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TRAPPC10P48553 1259 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 GABPB1Q06547 395 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TSNAXIP1Q2TAA8 658 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 PALD1Q9ULE6 856 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 CDK12Q9NYV4 1490 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 EIF3CLB5ME19 914 aaKnown RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 CAPN9O14815 690 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ABCD1P33897 745 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 PHKA1P46020 1223 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.29□□□□□ -0.926e-14■□□□□ 9.9
CTNND1-227ENST00000530748 EIF3CQ99613 913 aaKnown RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ANO3Q9BYT9 981 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ST7Q9NRC1 585 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 SEPT9Q9UHD8 586 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 BCAP29Q9UHQ4 241 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 LOC102724428A0A0B4J2F2 783 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 TMOD1P28289 359 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 SIK1P57059 783 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 PRPSAP1Q14558 356 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ERFEQ4G0M1 354 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 KIAA0825Q8IV33 1275 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ANKRD36BP1Q96IX9 119 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 AK8Q96MA6 479 aa9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ZNF277Q9NRM2 450 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-227ENST00000530748 ATF2P15336 505 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 LMNB1P20700 586 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 MAN1A1P33908 653 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 COPB1P53618 953 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 LRRC8AQ8IWT6 810 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 CNOT6LQ96LI5 555 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 IGSF1Q8N6C5 1336 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 A0A1W2PQ27 194 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 A0A1W2PQ64 194 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 A0A1W2PQD8 194 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 STX2P32856 288 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 PCK1P35558 622 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 GARSP41250 739 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 EXOC8Q8IYI6 725 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 NLGN1Q8N2Q7 840 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 MGARPQ8TDB4 240 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 PRPF31Q8WWY3 499 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 CCDC17Q96LX7 622 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ATG3Q9NT62 314 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 ANKFY1Q9P2R3 1169 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 AFG3L2Q9Y4W6 797 aa9.28□□□□□ -0.92
CTNND1-227ENST00000530748 BZW2Q9Y6E2 419 aaKnown RBP9.28□□□□□ -0.92
CTNND1-227ENST00000530748 TET3O43151 1660 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms