RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 PRSS53Q2L4Q9 553 aa8.7□□□□□ -1.02
CASP4-208ENST00000530309 TKFCQ3LXA3 575 aa8.7□□□□□ -1.02
CASP4-208ENST00000530309 WAPLQ7Z5K2 1190 aa8.7□□□□□ -1.02
CASP4-208ENST00000530309 KSR1Q8IVT5 923 aa8.7□□□□□ -1.02
CASP4-208ENST00000530309 KREMEN2Q8NCW0 462 aa8.7□□□□□ -1.02
CASP4-208ENST00000530309 NPLOC4Q8TAT6 608 aa8.7□□□□□ -1.02
CASP4-208ENST00000530309 FGF10O15520 208 aaPredicted RBP8.69□□□□□ -1.02
CASP4-208ENST00000530309 ZP2Q05996 745 aa8.69□□□□□ -1.02
CASP4-208ENST00000530309 DENND5AQ6IQ26 1287 aa8.69□□□□□ -1.02
CASP4-208ENST00000530309 ZPBP2Q6X784 338 aa8.69□□□□□ -1.02
CASP4-208ENST00000530309 ZNF574Q6ZN55 896 aaPredicted RBP8.69□□□□□ -1.02
CASP4-208ENST00000530309 WFDC3Q8IUB2 231 aa8.69□□□□□ -1.02
CASP4-208ENST00000530309 FRS2Q8WU20 508 aa8.69□□□□□ -1.02
CASP4-208ENST00000530309 SYTL4Q96C24 671 aaPredicted RBP8.69□□□□□ -1.02
CASP4-208ENST00000530309 NCOA5Q9HCD5 579 aaKnown RBP8.69□□□□□ -1.02
CASP4-208ENST00000530309 ACBD5Q5T8D3 534 aaPredicted RBP8.68□□□□□ -1.02
CASP4-208ENST00000530309 ZNF662Q6ZS27 426 aa8.68□□□□□ -1.02
CASP4-208ENST00000530309 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
CASP4-208ENST00000530309 ANGEL1Q9UNK9 670 aaKnown RBP8.68□□□□□ -1.02
CASP4-208ENST00000530309 CD2APQ9Y5K6 639 aa8.68□□□□□ -1.02
CASP4-208ENST00000530309 BLACEA4D250 179 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 PLD2O14939 933 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 PLS3P13797 630 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 NTRK3Q16288 839 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 CYP2R1Q6VVX0 501 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 NAT16Q8N8M0 369 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 FLCNQ8NFG4 579 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 FCRL2Q96LA5 508 aaPredicted RBP8.67□□□□□ -1.02
CASP4-208ENST00000530309 MRPL4Q9BYD3 311 aaKnown RBP8.67□□□□□ -1.02
CASP4-208ENST00000530309 SLKQ9H2G2 1235 aaPredicted RBP8.67□□□□□ -1.02
CASP4-208ENST00000530309 ERVK13-1Q9NX77 482 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 CLEC1BQ9P126 229 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 SBNO2Q9Y2G9 1366 aa8.67□□□□□ -1.02
CASP4-208ENST00000530309 TRBV23OR9-2A0A075B6M9 112 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 TBC1D8O95759 1140 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 C6orf222P0C671 652 aaPredicted RBP8.66□□□□□ -1.02
CASP4-208ENST00000530309 PAMP19021 973 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 GABREP78334 506 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 CBX2Q14781 532 aaPredicted RBP8.66□□□□□ -1.02
CASP4-208ENST00000530309 TESK1Q15569 626 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 TAF7LQ5H9L4 462 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 E4F1Q66K89 784 aaPredicted RBP8.66□□□□□ -1.02
CASP4-208ENST00000530309 IQCEQ6IPM2 695 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 NFXL1Q6ZNB6 911 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 USP53Q70EK8 1073 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 PPIL6Q8IXY8 311 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 PAK6Q9NQU5 681 aaPredicted RBP8.66□□□□□ -1.02
CASP4-208ENST00000530309 SLAMF8Q9P0V8 285 aa8.66□□□□□ -1.02
CASP4-208ENST00000530309 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.66□□□□□ -1.02
CASP4-208ENST00000530309 NPHP3-ACAD11A0A0J9YXS1 232 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 MEFVO15553 781 aaPredicted RBP8.65□□□□□ -1.02
CASP4-208ENST00000530309 RFPL3O75679 317 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 RAPGEF3O95398 923 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 GYS2P54840 703 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 FNDC3BQ53EP0 1204 aaKnown RBP8.65□□□□□ -1.02
CASP4-208ENST00000530309 DCAF4Q8WV16 495 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 PTPRN2Q92932 1015 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 ALPK1Q96QP1 1244 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 MMP19Q99542 508 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 TMEFF2Q9UIK5 374 aaPredicted RBP8.65□□□□□ -1.02
CASP4-208ENST00000530309 NPFFR2Q9Y5X5 522 aa8.65□□□□□ -1.02
CASP4-208ENST00000530309 ARNTLO00327 626 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 WNT11O96014 354 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 FUT4P22083 530 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 LTBRP36941 435 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 DUSP4Q13115 394 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 KCNAB2Q13303 367 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 TRIM61Q5EBN2 209 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 RALGPS1Q5JS13 557 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 STYK1Q6J9G0 422 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 MAMDC2Q7Z304 686 aaPredicted RBP8.64□□□□□ -1.03
CASP4-208ENST00000530309 CCDC103Q8IW40 242 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 TMEM52Q8NDY8 209 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 LINC01599Q8WXQ3 324 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 MAP6Q96JE9 813 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 G6PC3Q9BUM1 346 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 ADAMTS10Q9H324 1103 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 TNFRSF10DQ9UBN6 386 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 PLAAQ9Y263 795 aa8.64□□□□□ -1.03
CASP4-208ENST00000530309 KCNQ2O43526 872 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 EFCAB14O75071 495 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 ZGLP1P0C6A0 271 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 PABPC4Q13310 644 aaKnown RBP eCLIP8.63□□□□□ -1.03
CASP4-208ENST00000530309 DALRD3Q5D0E6 543 aaKnown RBP8.63□□□□□ -1.03
CASP4-208ENST00000530309 HLA-DQA1Q5Y7H0 255 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 SLC23A3Q6PIS1 610 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 RSPO2Q6UXX9 243 aaPredicted RBP8.63□□□□□ -1.03
CASP4-208ENST00000530309 DIO2Q92813 273 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 NINJ1Q92982 152 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 CLUHP3Q96NS8 147 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 NDOR1Q9UHB4 597 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 SFMBT1Q9UHJ3 866 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
CASP4-208ENST00000530309 CEBPAP49715 358 aaPredicted RBP8.62□□□□□ -1.03
CASP4-208ENST00000530309 C21orf62-AS1Q17RA5 79 aa8.62□□□□□ -1.03
CASP4-208ENST00000530309 ZMYM1Q5SVZ6 1142 aa8.62□□□□□ -1.03
CASP4-208ENST00000530309 KCNT2Q6UVM3 1135 aa8.62□□□□□ -1.03
CASP4-208ENST00000530309 CPNE8Q86YQ8 564 aa8.62□□□□□ -1.03
CASP4-208ENST00000530309 AGBL5Q8NDL9 886 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms