RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 HOMER1Q86YM7 354 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
TTC39A-216ENST00000530004 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 ZCCHC17Q9NP64 241 aaKnown RBP16.52■□□□□ 0.24
TTC39A-216ENST00000530004 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
TTC39A-216ENST00000530004 BAZ2BQ9UIF8 2168 aaKnown RBP16.51■□□□□ 0.23
TTC39A-216ENST00000530004 SPDYE16A6NNV3 312 aaPredicted RBP16.51■□□□□ 0.23
TTC39A-216ENST00000530004 NPY5RQ15761 445 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 P2RX7Q99572 595 aaKnown RBP16.51■□□□□ 0.23
TTC39A-216ENST00000530004 SEC63Q9UGP8 760 aaKnown RBP16.51■□□□□ 0.23
TTC39A-216ENST00000530004 PNMA3Q9UL41 463 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 YEATS4O95619 227 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 CYP2C8P10632 490 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 NASPP49321 788 aaPredicted RBP16.51■□□□□ 0.23
TTC39A-216ENST00000530004 STK38Q15208 465 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 LINC00301Q8NCQ3 95 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 ATG4CQ96DT6 458 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 PIGSQ96S52 555 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 BARHL2Q9NY43 387 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 TMEM63CQ9P1W3 806 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
TTC39A-216ENST00000530004 STXBP3O00186 592 aa16.5■□□□□ 0.23
TTC39A-216ENST00000530004 CALML3P27482 149 aa16.5■□□□□ 0.23
TTC39A-216ENST00000530004 HERVK_113P62684 666 aa16.5■□□□□ 0.23
TTC39A-216ENST00000530004 TYW1BQ6NUM6 668 aa16.5■□□□□ 0.23
TTC39A-216ENST00000530004 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
TTC39A-216ENST00000530004 VWA5AO00534 786 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
TTC39A-216ENST00000530004 ZSCAN23Q3MJ62 389 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 KCNG4Q8TDN1 519 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
TTC39A-216ENST00000530004 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 PARK7Q99497 189 aaKnown RBP16.49■□□□□ 0.23
TTC39A-216ENST00000530004 RANBP17Q9H2T7 1088 aaKnown RBP16.49■□□□□ 0.23
TTC39A-216ENST00000530004 FDX1P10109 184 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 ME1P48163 572 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
TTC39A-216ENST00000530004 RILPL1Q5EBL4 403 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 BICD2Q8TD16 824 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 SMCR8Q8TEV9 937 aaPredicted RBP16.49■□□□□ 0.23
TTC39A-216ENST00000530004 TNFRSF25Q93038 417 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 SLC38A10Q9HBR0 1119 aa16.49■□□□□ 0.23
TTC39A-216ENST00000530004 ZBTB5O15062 677 aa16.48■□□□□ 0.23
TTC39A-216ENST00000530004 SPTLC2O15270 562 aa16.48■□□□□ 0.23
TTC39A-216ENST00000530004 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
TTC39A-216ENST00000530004 NAPAP54920 295 aa16.48■□□□□ 0.23
TTC39A-216ENST00000530004 SNAP25P60880 206 aa16.48■□□□□ 0.23
TTC39A-216ENST00000530004 TAF1CQ15572 869 aaPredicted RBP16.48■□□□□ 0.23
TTC39A-216ENST00000530004 CDC37Q16543 378 aaPredicted RBP16.48■□□□□ 0.23
TTC39A-216ENST00000530004 EARS2Q5JPH6 523 aaKnown RBP16.48■□□□□ 0.23
TTC39A-216ENST00000530004 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
TTC39A-216ENST00000530004 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
TTC39A-216ENST00000530004 CCDC12Q8WUD4 166 aaPredicted RBP16.48■□□□□ 0.23
TTC39A-216ENST00000530004 PCDHA4Q9UN74 947 aa16.48■□□□□ 0.23
TTC39A-216ENST00000530004 FAM205CA6NFA0 338 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 ADAMTS3O15072 1205 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 ZBED4O75132 1171 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 LIG1P18858 919 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 QRICH1Q2TAL8 776 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 GALNT17Q6IS24 598 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 MB21D1Q8N884 522 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 PCDHA7Q9UN72 937 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 RLFQ13129 1914 aa16.47■□□□□ 0.23
TTC39A-216ENST00000530004 ZNF536O15090 1300 aa16.46■□□□□ 0.23
TTC39A-216ENST00000530004 PNMA6FA0A0J9YX94 578 aa16.46■□□□□ 0.23
TTC39A-216ENST00000530004 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
TTC39A-216ENST00000530004 PTPAQ15257 358 aa16.46■□□□□ 0.23
TTC39A-216ENST00000530004 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-216ENST00000530004 GTF3C2Q8WUA4 911 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-216ENST00000530004 RBPJLQ9UBG7 517 aa16.46■□□□□ 0.23
TTC39A-216ENST00000530004 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-216ENST00000530004 THSD7BQ9C0I4 1608 aa16.46■□□□□ 0.23
TTC39A-216ENST00000530004 CA12O43570 354 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 GCLCP48506 637 aaPredicted RBP16.46■□□□□ 0.22
TTC39A-216ENST00000530004 TMEM132BQ14DG7 1078 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 NOM1Q5C9Z4 860 aaKnown RBP16.46■□□□□ 0.22
TTC39A-216ENST00000530004 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 CCDC174Q6PII3 467 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 DAGLBQ8NCG7 672 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 ZFYVE28Q9HCC9 887 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 TXNRD2Q9NNW7 524 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 BTBD7Q9P203 1132 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.22
TTC39A-216ENST00000530004 NOL7Q9UMY1 257 aaKnown RBP16.46■□□□□ 0.22
TTC39A-216ENST00000530004 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.22
TTC39A-216ENST00000530004 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 ATP2A1O14983 1001 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms