RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 EEPD1Q7L9B9 569 aa13.52□□□□□ -0.25
SF3B2-208ENST00000529994 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.25
SF3B2-208ENST00000529994 SLC43A3Q8NBI5 491 aa13.52□□□□□ -0.25
SF3B2-208ENST00000529994 FEM1BQ9UK73 627 aa13.52□□□□□ -0.25
SF3B2-208ENST00000529994 LRRC37A2A6NM11 1700 aa13.51□□□□□ -0.25
SF3B2-208ENST00000529994 DYNC1LI2O43237 492 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-208ENST00000529994 SMARCA5O60264 1052 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-208ENST00000529994 ATP2A2P16615 1042 aaKnown RBP13.51□□□□□ -0.25
SF3B2-208ENST00000529994 SMPD1P17405 629 aa13.51□□□□□ -0.25
SF3B2-208ENST00000529994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
SF3B2-208ENST00000529994 FAM133AQ8N9E0 248 aa13.51□□□□□ -0.25
SF3B2-208ENST00000529994 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
SF3B2-208ENST00000529994 STRBPQ96SI9 672 aaKnown RBP13.51□□□□□ -0.25
SF3B2-208ENST00000529994 AP5M1Q9H0R1 490 aa13.51□□□□□ -0.25
SF3B2-208ENST00000529994 PDGFCQ9NRA1 345 aa13.51□□□□□ -0.25
SF3B2-208ENST00000529994 GNEQ9Y223 722 aaKnown RBP13.51□□□□□ -0.25
SF3B2-208ENST00000529994 IGKV6D-41A0A0C4DH26 115 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 SOWAHBA6NEL2 793 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 CABYRO75952 493 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
SF3B2-208ENST00000529994 NKX3-2P78367 333 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 SBK1Q52WX2 424 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 KRT40Q6A162 431 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 ZSCAN25Q6NSZ9 544 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 DEFB128Q7Z7B8 93 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
SF3B2-208ENST00000529994 VWCEQ96DN2 955 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 AGBL1Q96MI9 1066 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 C1QTNF1Q9BXJ1 281 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 EPHX3Q9H6B9 360 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 ACAD9Q9H845 621 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 A1CFQ9NQ94 594 aaKnown RBP13.5□□□□□ -0.25
SF3B2-208ENST00000529994 RNF146Q9NTX7 359 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 PCDHA11Q9Y5I1 949 aa13.5□□□□□ -0.25
SF3B2-208ENST00000529994 EPOPA6NHQ4 379 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 TMEM232C9JQI7 657 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 CA3P07451 260 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 CYP2C9P11712 490 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 BMP3P12645 472 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 OAZ1P54368 228 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 SNAP25P60880 206 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 IKQ13123 557 aaPredicted RBP13.49□□□□□ -0.25
SF3B2-208ENST00000529994 AAK1Q2M2I8 961 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 SLFN13Q68D06 897 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 RPUSD2Q8IZ73 545 aaKnown RBP13.49□□□□□ -0.25
SF3B2-208ENST00000529994 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
SF3B2-208ENST00000529994 TRMT13Q9NUP7 481 aaKnown RBP13.49□□□□□ -0.25
SF3B2-208ENST00000529994 MTMR4Q9NYA4 1195 aa13.49□□□□□ -0.25
SF3B2-208ENST00000529994 ASB14A6NK59 587 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 ERC2O15083 957 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 ZEB2O60315 1214 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 TTLL1O95922 423 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 ALAS1P13196 640 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 PPP1R13LQ8WUF5 828 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 OSBP2Q969R2 916 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 MKL1Q969V6 931 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 TRERF1Q96PN7 1200 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 PURBQ96QR8 312 aaKnown RBP13.48□□□□□ -0.25
SF3B2-208ENST00000529994 LRRCC1Q9C099 1032 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 EPB41L4AQ9HCS5 686 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-208ENST00000529994 MTCH2Q9Y6C9 303 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 LCTP09848 1927 aa13.48□□□□□ -0.25
SF3B2-208ENST00000529994 ZNF536O15090 1300 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 GTPBP6O43824 516 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-208ENST00000529994 APPP05067 770 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-208ENST00000529994 TDO2P48775 406 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 MUM1L1Q5H9M0 696 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 TAPT1Q6NXT6 567 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 GMCL1P1Q8NEA9 526 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 ARNTL2Q8WYA1 636 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
SF3B2-208ENST00000529994 ALDH8A1Q9H2A2 487 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-208ENST00000529994 ARHGEF15O94989 841 aa13.46□□□□□ -0.25
SF3B2-208ENST00000529994 MCCP23508 829 aa13.46□□□□□ -0.25
SF3B2-208ENST00000529994 STAT2P52630 851 aa13.46□□□□□ -0.25
SF3B2-208ENST00000529994 IQSEC1Q6DN90 963 aa13.46□□□□□ -0.25
SF3B2-208ENST00000529994 NSMFQ6X4W1 530 aa13.46□□□□□ -0.25
SF3B2-208ENST00000529994 KIAA1211Q6ZU35 1233 aa13.46□□□□□ -0.25
SF3B2-208ENST00000529994 TET1Q8NFU7 2136 aa13.46□□□□□ -0.26
SF3B2-208ENST00000529994 TNKSO95271 1327 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 BRWD1Q9NSI6 2320 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 MYL3P08590 195 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 TSPY3P0CV98 308 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 TSPY8P0CW00 308 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 SLC1A4P43007 532 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 KCTD1Q719H9 257 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 RASGRP2Q7LDG7 609 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 CHURC1Q8WUH1 139 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 CYP39A1Q9NYL5 469 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 HCN4Q9Y3Q4 1203 aa13.45□□□□□ -0.26
SF3B2-208ENST00000529994 TRIP12Q14669 1992 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms