RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 BTBD11A6QL63 1104 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 KCNH1O95259 989 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
C11orf88-204ENST00000529661 FXNQ16595 210 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 HLA-DQA1Q5Y7H0 255 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 CYP2R1Q6VVX0 501 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 RCC1LQ96I51 464 aaKnown RBP7.01□□□□□ -1.29
C11orf88-204ENST00000529661 PTCHD1Q96NR3 888 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 CRTAC1Q9NQ79 661 aa7.01□□□□□ -1.29
C11orf88-204ENST00000529661 OR14I1A6ND48 311 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 NOP56O00567 594 aaKnown RBP7□□□□□ -1.29
C11orf88-204ENST00000529661 AURKAO14965 403 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 ARL4AP40617 200 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 SEPHS1P49903 392 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 EEF1DP3Q658K8 133 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 MICAL1Q8TDZ2 1067 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 HNRNPLLQ8WVV9 542 aaKnown RBP7□□□□□ -1.29
C11orf88-204ENST00000529661 PPP1R16BQ96T49 567 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 LGR4Q9BXB1 951 aa7□□□□□ -1.29
C11orf88-204ENST00000529661 TBC1D8O95759 1140 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 PNLIPP16233 465 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 ZNF143P52747 638 aaPredicted RBP6.99□□□□□ -1.29
C11orf88-204ENST00000529661 CYP4F8P98187 520 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 GRB10Q13322 594 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 SOGA3Q5TF21 947 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 RCSD1Q6JBY9 416 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 POMZP3Q6PJE2 187 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 ANKS3Q6ZW76 656 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 DPH6Q7L8W6 267 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 ZNF513Q8N8E2 541 aaPredicted RBP6.99□□□□□ -1.29
C11orf88-204ENST00000529661 BVESQ8NE79 360 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 SLC26A8Q96RN1 970 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 DNAJC2Q99543 621 aaKnown RBP6.99□□□□□ -1.29
C11orf88-204ENST00000529661 BACE2Q9Y5Z0 518 aa6.99□□□□□ -1.29
C11orf88-204ENST00000529661 A0A1W2PQJ5 194 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 C2orf71A6NGG8 1288 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 NFIBO00712 420 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 TMEM253P0C7T8 217 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 RAP1GAPP47736 663 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 FZD5Q13467 585 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 LAPTM5Q13571 262 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 SV2CQ496J9 727 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 TMEM132EQ6IEE7 984 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 CRACR2BQ8N4Y2 399 aaPredicted RBP6.98□□□□□ -1.29
C11orf88-204ENST00000529661 KCNN1Q92952 543 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 HIRIP3Q9BW71 556 aaPredicted RBP6.98□□□□□ -1.29
C11orf88-204ENST00000529661 LRP2BPQ9P2M1 347 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 EMC9Q9Y3B6 208 aa6.98□□□□□ -1.29
C11orf88-204ENST00000529661 MYOCOSA0A1B0GUC4 107 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 SUSD5O60279 629 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 GJB6O95452 261 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 TSPAN15O95858 294 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 MSL3P1P0C860 447 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 TACR1P25103 407 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 MRM1Q6IN84 353 aaKnown RBP6.97□□□□□ -1.29
C11orf88-204ENST00000529661 CELF2-AS1Q8N7Q2 184 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 LNPKQ9C0E8 428 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 ZNF552Q9H707 407 aaPredicted RBP6.97□□□□□ -1.29
C11orf88-204ENST00000529661 ST7Q9NRC1 585 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 ACSL6Q9UKU0 697 aa6.97□□□□□ -1.29
C11orf88-204ENST00000529661 NUDT19A8MXV4 375 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 ETV2O00321 342 aaPredicted RBP6.96□□□□□ -1.3
C11orf88-204ENST00000529661 MPOP05164 745 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 C1QTNF9P0C862 333 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 L1CAMP32004 1257 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 MVKQ03426 396 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 SCRN1Q12765 414 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 RAB3GAP1Q15042 981 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 TRIM59Q8IWR1 403 aa6.96□□□□□ -1.3
C11orf88-204ENST00000529661 BHLHE22Q8NFJ8 381 aaPredicted RBP6.96□□□□□ -1.3
C11orf88-204ENST00000529661 PEX10O60683 326 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
C11orf88-204ENST00000529661 PAMP19021 973 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 SRSF3P84103 164 aaKnown RBP6.95□□□□□ -1.3
C11orf88-204ENST00000529661 GTF2IRD2BQ6EKJ0 949 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 ATG14Q6ZNE5 492 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 EEPD1Q7L9B9 569 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 GTF2IRD2Q86UP8 949 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 CPNE8Q86YQ8 564 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 BTN2A2Q8WVV5 523 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 SGPP1Q9BX95 441 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 TNFRSF12AQ9NP84 129 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
C11orf88-204ENST00000529661 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 NPHP3-ACAD11A0A0J9YXS1 232 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 TCAF2A6NFQ2 919 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 TBX1O43435 398 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 KRT1P04264 644 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 ITGAVP06756 1048 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 BICRALQ6AI39 1079 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 ZNF227Q86WZ6 799 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 MRGPRX3Q96LB0 322 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 PDLIM7Q9NR12 457 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 SIRT5Q9NXA8 310 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 CLEC1BQ9P126 229 aa6.94□□□□□ -1.3
C11orf88-204ENST00000529661 DBX1A6NMT0 343 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 SEMA7AO75326 666 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 PLS3P13797 630 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms