RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 TOP1P11387 765 aaKnown RBP7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 Q3C1V9 767 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 RNF20Q5VTR2 975 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 SLFN13Q68D06 897 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 LBX2Q6XYB7 198 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 TSHZ1Q6ZSZ6 1077 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 STOX1Q6ZVD7 989 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 CYB5R4Q7L1T6 521 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 DPH6Q7L8W6 267 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 ANKRD13CQ8N6S4 541 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 GTF3C2Q8WUA4 911 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 KCNB2Q92953 911 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 ERO1AQ96HE7 468 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 ZSCAN10Q96SZ4 725 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 TMEM47Q9BQJ4 181 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 ZKSCAN3Q9BRR0 538 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 ADAMTS5Q9UNA0 930 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 SH3BP1Q9Y3L3 701 aa7.33□□□□□ -1.24
ATPAF1-209ENST00000529214 PTPRFP10586 1907 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 GREB1LQ9C091 1923 aaPredicted RBP7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 HSPA4P34932 840 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 LACTBP83111 547 aaPredicted RBP7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 CAP1Q01518 475 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 ARHGEF6Q15052 776 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 SEC23AQ15436 765 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 FAM110CQ1W6H9 321 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 FAM83BQ5T0W9 1011 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 GPR153Q6NV75 609 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 RALYLQ86SE5 291 aaKnown RBP7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 LRRC47Q8N1G4 583 aaKnown RBP7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 PRR7Q8TB68 274 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 CD99L2Q8TCZ2 262 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 GMCL1Q96IK5 515 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 NUP88Q99567 741 aaPredicted RBP7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 USP26Q9BXU7 913 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 TANGO6Q9C0B7 1094 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 TXNRD2Q9NNW7 524 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 MORF4L1Q9UBU8 362 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 BIN2Q9UBW5 565 aaPredicted RBP7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 RABGAP1Q9Y3P9 1069 aa7.32□□□□□ -1.24
ATPAF1-209ENST00000529214 MAP3K7O43318 606 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 EVI5O60447 810 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 PEX10O60683 326 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 PLA2G6O60733 806 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 CNMDO75829 334 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 FLOT1O75955 427 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 GNRH1P01148 92 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 HSP90AA1P07900 732 aaKnown RBP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 BMP3P12645 472 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 ZKSCAN1P17029 563 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 ERCC5P28715 1186 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 CTGFP29279 349 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 SLC1A4P43007 532 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 PSMC4P43686 418 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 LSM11P83369 360 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 KIF22Q14807 665 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 CTU1Q7Z7A3 348 aaKnown RBP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 MB21D2Q8IYB1 491 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 ENAHQ8N8S7 591 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 PRPF38AQ8NAV1 312 aaKnown RBP7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 GPRC5AQ8NFJ5 357 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 IGDCC4Q8TDY8 1250 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 PXYLP1Q8TE99 480 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 NEK1Q96PY6 1258 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 UBAC1Q9BSL1 405 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 MTA3Q9BTC8 594 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 EFCC1Q9HA90 598 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 FBXO28Q9NVF7 368 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 TMEM51Q9NW97 253 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 BTBD7Q9P203 1132 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 HCSTQ9UBK5 93 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 FEM1BQ9UK73 627 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 TNKSO95271 1327 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 MYPNQ86TC9 1320 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 MYH8P13535 1937 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 LOC285556D6RIA3 1793 aa7.31□□□□□ -1.24
ATPAF1-209ENST00000529214 C2orf72A6NCS6 295 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 TMEM232C9JQI7 657 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 VWA5AO00534 786 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 IFIT3O14879 490 aaKnown RBP7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 ATP9BO43861 1147 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 FMNL1O95466 1100 aaPredicted RBP7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 SNHG28P0DPA3 235 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 PDHBP11177 359 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 MCM5P33992 734 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 SERPINB4P48594 390 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 ANTXR2P58335 489 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 ERVK-9P63128 1117 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 ERVK-24P63145 666 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 EXOSC10Q01780 885 aaKnown RBP7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 COL9A3Q14050 684 aaPredicted RBP7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 KRT32Q14532 448 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 PKN2Q16513 984 aaKnown RBP7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 ADCK5Q3MIX3 580 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 IFIT1BQ5T764 474 aaKnown RBP7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 CHST3Q7LGC8 479 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 OTOP1Q7RTM1 612 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 MB21D1Q8N884 522 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 PNMA1Q8ND90 353 aa7.3□□□□□ -1.24
ATPAF1-209ENST00000529214 CHURC1Q8WUH1 139 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms