RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 UBA5Q9GZZ9 404 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 VAT1LQ9HCJ6 419 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 PRDM5Q9NQX1 630 aaPredicted RBP10.62□□□□□ -0.71
CMTM1-210ENST00000528441 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
CMTM1-210ENST00000528441 DIS3Q9Y2L1 958 aaKnown RBP10.62□□□□□ -0.71
CMTM1-210ENST00000528441 DNM1LO00429 736 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 ATP2A1O14983 1001 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 ICAM1P05362 532 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 FGRP09769 529 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 TAL1P17542 331 aaPredicted RBP10.61□□□□□ -0.71
CMTM1-210ENST00000528441 ZNF543Q08ER8 600 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 WTAPQ15007 396 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 NFXL1Q6ZNB6 911 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 EEPD1Q7L9B9 569 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 TRPV1Q8NER1 839 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 FERMT2Q96AC1 680 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.61□□□□□ -0.71
CMTM1-210ENST00000528441 PNMA2Q9UL42 364 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 FAM184BQ9ULE4 1060 aa10.61□□□□□ -0.71
CMTM1-210ENST00000528441 ASB14A6NK59 587 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 SGSM2O43147 1006 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 PLA2G6O60733 806 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 PGK1P00558 417 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 CNTN2Q02246 1040 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 PTH1RQ03431 593 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 ARMCX2Q7L311 632 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 LENG1Q96BZ8 264 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-210ENST00000528441 LBHD1Q9BQE6 289 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-210ENST00000528441 IL25Q9H293 177 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
CMTM1-210ENST00000528441 A1CFQ9NQ94 594 aaKnown RBP10.6□□□□□ -0.71
CMTM1-210ENST00000528441 ZSWIM5Q9P217 1185 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
CMTM1-210ENST00000528441 NRBP1Q9UHY1 535 aa10.6□□□□□ -0.71
CMTM1-210ENST00000528441 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-210ENST00000528441 RBM8AQ9Y5S9 174 aaKnown RBP10.6□□□□□ -0.71
CMTM1-210ENST00000528441 SYNGAP1Q96PV0 1343 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 MYH6P13533 1939 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 B4DLN1 442 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 CYP21A2P08686 494 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 C6orf222P0C671 652 aaPredicted RBP10.59□□□□□ -0.71
CMTM1-210ENST00000528441 C7P10643 843 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 MRPL12P52815 198 aaKnown RBP10.59□□□□□ -0.71
CMTM1-210ENST00000528441 ACVR2BQ13705 512 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 CDC37Q16543 378 aaPredicted RBP10.59□□□□□ -0.71
CMTM1-210ENST00000528441 MUM1L1Q5H9M0 696 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 TMEM67Q5HYA8 995 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 RNF207Q6ZRF8 634 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 CHST3Q7LGC8 479 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 CATIPQ7Z7H3 387 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 SKAP1Q86WV1 359 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 HOMER1Q86YM7 354 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 MSL3Q8N5Y2 521 aaKnown RBP10.59□□□□□ -0.71
CMTM1-210ENST00000528441 ENAHQ8N8S7 591 aaPredicted RBP10.59□□□□□ -0.71
CMTM1-210ENST00000528441 CPVLQ9H3G5 476 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 ABHD16BQ9H3Z7 469 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 MCM3APO60318 1980 aa10.59□□□□□ -0.71
CMTM1-210ENST00000528441 ZNF536O15090 1300 aa10.58□□□□□ -0.71
CMTM1-210ENST00000528441 CCDC69A6NI79 296 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 E7EWF7 191 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 RTP1P59025 263 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 FGD1P98174 961 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 PDE4DQ08499 809 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 BAATQ14032 418 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-210ENST00000528441 LRRC41Q15345 812 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 LRRC26Q2I0M4 334 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 HABP4Q5JVS0 413 aaKnown RBP10.58□□□□□ -0.72
CMTM1-210ENST00000528441 RNF20Q5VTR2 975 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 CYB5R4Q7L1T6 521 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 UBE2Q1Q7Z7E8 422 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-210ENST00000528441 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 ESYT1Q9BSJ8 1104 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 AP5M1Q9H0R1 490 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 STARD7Q9NQZ5 370 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-210ENST00000528441 TNRC18O15417 2968 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-210ENST00000528441 BRCA2P51587 3418 aa10.58□□□□□ -0.72
CMTM1-210ENST00000528441 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 NFIBO00712 420 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 CDC45O75419 566 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 ZNF865P0CJ78 1059 aaPredicted RBP10.57□□□□□ -0.72
CMTM1-210ENST00000528441 MDM2Q00987 491 aaPredicted RBP10.57□□□□□ -0.72
CMTM1-210ENST00000528441 TNFAIP2Q03169 654 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 CCDC144BQ3MJ40 725 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 SLC30A10Q6XR72 485 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 SYNE3Q6ZMZ3 975 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 FBXO11Q86XK2 927 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 CTCFLQ8NI51 663 aaPredicted RBP10.57□□□□□ -0.72
CMTM1-210ENST00000528441 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 UBE2OQ9C0C9 1292 aaKnown RBP10.57□□□□□ -0.72
CMTM1-210ENST00000528441 CYP39A1Q9NYL5 469 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms