RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 CYP39A1Q9NYL5 469 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 CCPG1Q9ULG6 757 aa30.52■■■□□ 2.48
TRIM3-206ENST00000528227 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.51■■■□□ 2.47
TRIM3-206ENST00000528227 ICAM1P05362 532 aa30.51■■■□□ 2.47
TRIM3-206ENST00000528227 TOP1P11387 765 aaKnown RBP30.51■■■□□ 2.47
TRIM3-206ENST00000528227 CDK7P50613 346 aa30.51■■■□□ 2.47
TRIM3-206ENST00000528227 TTBK2Q6IQ55 1244 aa30.51■■■□□ 2.47
TRIM3-206ENST00000528227 BTNL9Q6UXG8 535 aa30.51■■■□□ 2.47
TRIM3-206ENST00000528227 MROH7Q68CQ1 1323 aa30.5■■■□□ 2.47
TRIM3-206ENST00000528227 LCTP09848 1927 aa30.5■■■□□ 2.47
TRIM3-206ENST00000528227 SMAD3P84022 425 aaKnown RBP30.5■■■□□ 2.47
TRIM3-206ENST00000528227 TNFAIP2Q03169 654 aa30.5■■■□□ 2.47
TRIM3-206ENST00000528227 FPGSQ05932 587 aa30.5■■■□□ 2.47
TRIM3-206ENST00000528227 RILPL2Q969X0 211 aa30.5■■■□□ 2.47
TRIM3-206ENST00000528227 SLC16A2P36021 539 aa30.49■■■□□ 2.47
TRIM3-206ENST00000528227 HAND2P61296 217 aa30.49■■■□□ 2.47
TRIM3-206ENST00000528227 B4GALNT3Q6L9W6 998 aa30.49■■■□□ 2.47
TRIM3-206ENST00000528227 RWDD1Q9H446 243 aaPredicted RBP30.49■■■□□ 2.47
TRIM3-206ENST00000528227 TBX21Q9UL17 535 aa30.49■■■□□ 2.47
TRIM3-206ENST00000528227 GNEQ9Y223 722 aaKnown RBP30.49■■■□□ 2.47
TRIM3-206ENST00000528227 DDX49Q9Y6V7 483 aaKnown RBP30.49■■■□□ 2.47
TRIM3-206ENST00000528227 A0A0U1RQG5 324 aaPredicted RBP30.48■■■□□ 2.47
TRIM3-206ENST00000528227 SYDE2Q5VT97 1194 aa30.48■■■□□ 2.47
TRIM3-206ENST00000528227 NSMFQ6X4W1 530 aa30.48■■■□□ 2.47
TRIM3-206ENST00000528227 VTI1AQ96AJ9 217 aa30.48■■■□□ 2.47
TRIM3-206ENST00000528227 RNPC3Q96LT9 517 aaKnown RBP30.48■■■□□ 2.47
TRIM3-206ENST00000528227 FRMPD2Q68DX3 1309 aaPredicted RBP30.47■■■□□ 2.47
TRIM3-206ENST00000528227 ARVCFO00192 962 aa30.47■■■□□ 2.47
TRIM3-206ENST00000528227 TIMP1P01033 207 aa30.47■■■□□ 2.47
TRIM3-206ENST00000528227 BEX3Q00994 111 aa30.47■■■□□ 2.47
TRIM3-206ENST00000528227 AKNAD1Q5T1N1 836 aa30.47■■■□□ 2.47
TRIM3-206ENST00000528227 NOL8Q76FK4 1167 aaKnown RBP30.47■■■□□ 2.47
TRIM3-206ENST00000528227 DLL1O00548 723 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 PCP11498 1178 aaKnown RBP30.46■■■□□ 2.47
TRIM3-206ENST00000528227 SDSP20132 328 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 MFSD6Q6ZSS7 791 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 TLK2Q86UE8 772 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 CHD1LQ86WJ1 897 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 TBC1D10CQ8IV04 446 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 PLEKHM2Q8IWE5 1019 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 YTHDC1Q96MU7 727 aaKnown RBP30.46■■■□□ 2.47
TRIM3-206ENST00000528227 PURBQ96QR8 312 aaKnown RBP30.46■■■□□ 2.47
TRIM3-206ENST00000528227 GPCPD1Q9NPB8 672 aa30.46■■■□□ 2.47
TRIM3-206ENST00000528227 PDHBP11177 359 aa30.45■■■□□ 2.47
TRIM3-206ENST00000528227 SMPD1P17405 629 aa30.45■■■□□ 2.47
TRIM3-206ENST00000528227 MFAP1P55081 439 aaKnown RBP30.45■■■□□ 2.47
TRIM3-206ENST00000528227 TAPT1Q6NXT6 567 aa30.45■■■□□ 2.47
TRIM3-206ENST00000528227 FBXO16Q8IX29 292 aaPredicted RBP30.45■■■□□ 2.47
TRIM3-206ENST00000528227 MORC4Q8TE76 937 aa30.45■■■□□ 2.47
TRIM3-206ENST00000528227 TTC14Q96N46 770 aa30.45■■■□□ 2.47
TRIM3-206ENST00000528227 OSBPL3Q9H4L5 887 aa30.45■■■□□ 2.47
TRIM3-206ENST00000528227 PDGFCQ9NRA1 345 aa30.45■■■□□ 2.47
TRIM3-206ENST00000528227 IGHDP01880 384 aa30.44■■■□□ 2.46
TRIM3-206ENST00000528227 EEPD1Q7L9B9 569 aa30.44■■■□□ 2.46
TRIM3-206ENST00000528227 FAM126BQ8IXS8 530 aa30.44■■■□□ 2.46
TRIM3-206ENST00000528227 SEMA6BQ9H3T3 888 aa30.44■■■□□ 2.46
TRIM3-206ENST00000528227 NUCB1Q02818 461 aa30.43■■■□□ 2.46
TRIM3-206ENST00000528227 BAATQ14032 418 aaPredicted RBP30.43■■■□□ 2.46
TRIM3-206ENST00000528227 IQSEC1Q6DN90 963 aa30.43■■■□□ 2.46
TRIM3-206ENST00000528227 MFSD5Q6N075 450 aa30.43■■■□□ 2.46
TRIM3-206ENST00000528227 NFIBO00712 420 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 SNHG28P0DPA3 235 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 PTGS1P23219 599 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 ZNF543Q08ER8 600 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 FSCN1Q16658 493 aaKnown RBP30.42■■■□□ 2.46
TRIM3-206ENST00000528227 CXCL17Q6UXB2 119 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 CDX2Q99626 313 aaPredicted RBP30.42■■■□□ 2.46
TRIM3-206ENST00000528227 AP5M1Q9H0R1 490 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 TTYH1Q9H313 450 aaPredicted RBP30.42■■■□□ 2.46
TRIM3-206ENST00000528227 RNF41Q9H4P4 317 aaPredicted RBP30.42■■■□□ 2.46
TRIM3-206ENST00000528227 VTA1Q9NP79 307 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 NEDD4P46934 1319 aa30.42■■■□□ 2.46
TRIM3-206ENST00000528227 LAMA4Q16363 1823 aa30.41■■■□□ 2.46
TRIM3-206ENST00000528227 TMEM63BQ5T3F8 832 aa30.41■■■□□ 2.46
TRIM3-206ENST00000528227 SLC43A3Q8NBI5 491 aa30.41■■■□□ 2.46
TRIM3-206ENST00000528227 ADD3Q9UEY8 706 aaKnown RBP30.41■■■□□ 2.46
TRIM3-206ENST00000528227 Q9Y3F1 56 aa30.41■■■□□ 2.46
TRIM3-206ENST00000528227 TLR3O15455 904 aaKnown RBP30.4■■■□□ 2.46
TRIM3-206ENST00000528227 DYNC1LI2O43237 492 aaPredicted RBP30.4■■■□□ 2.46
TRIM3-206ENST00000528227 CABYRO75952 493 aa30.4■■■□□ 2.46
TRIM3-206ENST00000528227 CD4P01730 458 aa30.4■■■□□ 2.46
TRIM3-206ENST00000528227 ALDH5A1P51649 535 aaPredicted RBP30.4■■■□□ 2.46
TRIM3-206ENST00000528227 ESR2Q92731 530 aa30.4■■■□□ 2.46
TRIM3-206ENST00000528227 EXOC6Q8TAG9 804 aa30.39■■■□□ 2.46
TRIM3-206ENST00000528227 CLEC4DQ8WXI8 215 aa30.39■■■□□ 2.46
TRIM3-206ENST00000528227 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.39■■■□□ 2.46
TRIM3-206ENST00000528227 PNMA2Q9UL42 364 aa30.39■■■□□ 2.46
TRIM3-206ENST00000528227 LOC102724159A0A0B4J2E5 919 aa30.38■■■□□ 2.45
TRIM3-206ENST00000528227 PTPDC1A2A3K4 754 aa30.38■■■□□ 2.45
TRIM3-206ENST00000528227 ZNF213O14771 459 aa30.38■■■□□ 2.45
TRIM3-206ENST00000528227 ZEB2O60315 1214 aa30.38■■■□□ 2.45
TRIM3-206ENST00000528227 PPIGQ13427 754 aaKnown RBP eCLIP30.38■■■□□ 2.45
TRIM3-206ENST00000528227 PWP2Q15269 919 aaKnown RBP30.38■■■□□ 2.45
TRIM3-206ENST00000528227 CWC27Q6UX04 472 aaKnown RBP30.38■■■□□ 2.45
TRIM3-206ENST00000528227 SLC30A10Q6XR72 485 aa30.38■■■□□ 2.45
TRIM3-206ENST00000528227 KIAA1211Q6ZU35 1233 aa30.38■■■□□ 2.45
TRIM3-206ENST00000528227 TMEM265A0A087WTH1 108 aa30.37■■■□□ 2.45
TRIM3-206ENST00000528227 C16orf59Q7L2K0 433 aa30.37■■■□□ 2.45
TRIM3-206ENST00000528227 ZKSCAN3Q9BRR0 538 aa30.37■■■□□ 2.45
TRIM3-206ENST00000528227 PPP1R12CQ9BZL4 782 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms