RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 DEFB123Q8N688 67 aa17.85■□□□□ 0.45
EXOSC4-203ENST00000527954 NUP133Q8WUM0 1156 aa17.85■□□□□ 0.45
EXOSC4-203ENST00000527954 ESR2Q92731 530 aa17.85■□□□□ 0.45
EXOSC4-203ENST00000527954 PURBQ96QR8 312 aaKnown RBP17.85■□□□□ 0.45
EXOSC4-203ENST00000527954 SPC25Q9HBM1 224 aa17.85■□□□□ 0.45
EXOSC4-203ENST00000527954 LAMA3Q16787 3333 aa17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 MOXD2PA6NHM9 499 aa17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 ASGR1P07306 291 aa17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 CLTBP09497 229 aa17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 PDE4AP27815 886 aa17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 CST5P28325 142 aaPredicted RBP17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 GJA9P57773 515 aa17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 TNFAIP2Q03169 654 aa17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 UPF3AQ9H1J1 476 aaKnown RBP17.84■□□□□ 0.45
EXOSC4-203ENST00000527954 KDM4AO75164 1064 aa17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 ITGB8P26012 769 aa17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 ZNF543Q08ER8 600 aa17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 BAATQ14032 418 aaPredicted RBP17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 SHHQ15465 462 aa17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 GNASQ5JWF2 1037 aa17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 NOL8Q76FK4 1167 aaKnown RBP17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 EEPD1Q7L9B9 569 aa17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 PCSK9Q8NBP7 692 aaKnown RBP17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 VTI1AQ96AJ9 217 aa17.83■□□□□ 0.44
EXOSC4-203ENST00000527954 LTBP2Q14767 1821 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 NFIBO00712 420 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 CTAGE5O15320 804 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 BEX3Q00994 111 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 FAAP100Q0VG06 881 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 C9orf50Q5SZB4 431 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 ANKRD33Q7Z3H0 272 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 DGKHQ86XP1 1220 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 GLT1D1Q96MS3 346 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 DSCC1Q9BVC3 393 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 PDGFCQ9NRA1 345 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 TMEM39AQ9NV64 488 aa17.82■□□□□ 0.44
EXOSC4-203ENST00000527954 ELP1O95163 1332 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 PTPDC1A2A3K4 754 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 DCDC2CA8MYV0 355 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 B4E1Z4 1266 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 KIAA0355O15063 1070 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 RAG1P15918 1043 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 PTGS1P23219 599 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 IMMTQ16891 758 aaKnown RBP17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 FBXO16Q8IX29 292 aaPredicted RBP17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 TOX2Q96NM4 488 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 IL25Q9H293 177 aa17.81■□□□□ 0.44
EXOSC4-203ENST00000527954 GSPT1P15170 499 aaKnown RBP17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 SMPD1P17405 629 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 TMEM63BQ5T3F8 832 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 TAPT1Q6NXT6 567 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 IQCA1Q86XH1 822 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 PNMA1Q8ND90 353 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 CLEC4DQ8WXI8 215 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 ZSCAN10Q96SZ4 725 aaPredicted RBP17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 UBA5Q9GZZ9 404 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 CPVLQ9H3G5 476 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 MTMR10Q9NXD2 777 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 ZSWIM5Q9P217 1185 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
EXOSC4-203ENST00000527954 MCM3APO60318 1980 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 DYNC1LI2O43237 492 aaPredicted RBP17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 CALML3P27482 149 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 CDK7P50613 346 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 ALDH5A1P51649 535 aaPredicted RBP17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 EPHB4P54760 987 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 NKX3-2P78367 333 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 CCDC178Q5BJE1 867 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 GPATCH4Q5T3I0 446 aaKnown RBP17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 TTC22Q5TAA0 569 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 IQSEC1Q6DN90 963 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 TLK2Q86UE8 772 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 MORC4Q8TE76 937 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 AP5M1Q9H0R1 490 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 ADD3Q9UEY8 706 aaKnown RBP17.79■□□□□ 0.44
EXOSC4-203ENST00000527954 A0A0U1RQG5 324 aaPredicted RBP17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 ARVCFO00192 962 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 NT5C2P49902 561 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 CXCL17Q6UXB2 119 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 RNF207Q6ZRF8 634 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 ANKS1AQ92625 1134 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 VTA1Q9NP79 307 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 PNMA2Q9UL42 364 aa17.78■□□□□ 0.44
EXOSC4-203ENST00000527954 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
EXOSC4-203ENST00000527954 FPGSQ05932 587 aa17.77■□□□□ 0.44
EXOSC4-203ENST00000527954 FSCN1Q16658 493 aaKnown RBP17.77■□□□□ 0.44
EXOSC4-203ENST00000527954 USH1GQ495M9 461 aa17.77■□□□□ 0.44
EXOSC4-203ENST00000527954 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
EXOSC4-203ENST00000527954 KRT23Q9C075 422 aa17.77■□□□□ 0.44
EXOSC4-203ENST00000527954 TNKSO95271 1327 aa17.76■□□□□ 0.43
EXOSC4-203ENST00000527954 MROH7Q68CQ1 1323 aa17.76■□□□□ 0.43
EXOSC4-203ENST00000527954 LRRC37A2A6NM11 1700 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms