RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 ZHX2Q9Y6X8 837 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 ZNF827Q17R98 1081 aa16.76■□□□□ 0.27
USP47-207ENST00000527733 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
USP47-207ENST00000527733 PIK3C2AO00443 1686 aa16.76■□□□□ 0.27
USP47-207ENST00000527733 FAM83BQ5T0W9 1011 aa16.76■□□□□ 0.27
USP47-207ENST00000527733 CCDC84Q86UT8 332 aaPredicted RBP16.76■□□□□ 0.27
USP47-207ENST00000527733 NAA15Q9BXJ9 866 aaKnown RBP16.76■□□□□ 0.27
USP47-207ENST00000527733 POLLQ9UGP5 575 aa16.76■□□□□ 0.27
USP47-207ENST00000527733 CNOT7Q9UIV1 285 aaKnown RBP16.76■□□□□ 0.27
USP47-207ENST00000527733 RPN1P04843 607 aaKnown RBP16.76■□□□□ 0.27
USP47-207ENST00000527733 RBM10P98175 930 aaKnown RBP16.76■□□□□ 0.27
USP47-207ENST00000527733 WDR44Q5JSH3 913 aa16.76■□□□□ 0.27
USP47-207ENST00000527733 ARL6IP4Q66PJ3 421 aaKnown RBP16.76■□□□□ 0.27
USP47-207ENST00000527733 NUP58Q9BVL2 599 aa16.76■□□□□ 0.27
USP47-207ENST00000527733 ANO3Q9BYT9 981 aa16.76■□□□□ 0.27
USP47-207ENST00000527733 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 PPP4CP60510 307 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 MICALL2Q8IY33 904 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 CDHR1Q96JP9 859 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 POTEB2H3BUK9 544 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 MCM3P25205 808 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 LARP4BQ92615 738 aaKnown RBP16.75■□□□□ 0.27
USP47-207ENST00000527733 PLVAPQ9BX97 442 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 SERPINA10Q9UK55 444 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 SLFN14P0C7P3 912 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 AP3B2Q13367 1082 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 VWA3BQ502W6 1294 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 MTFR1LQ9H019 292 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 SPC25Q9HBM1 224 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 SALL3Q9BXA9 1300 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 XRN1Q8IZH2 1706 aaKnown RBP16.75■□□□□ 0.27
USP47-207ENST00000527733 SPP2Q13103 211 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 TMCO3Q6UWJ1 677 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 PANK4Q9NVE7 773 aa16.75■□□□□ 0.27
USP47-207ENST00000527733 POLRMTO00411 1230 aaKnown RBP16.74■□□□□ 0.27
USP47-207ENST00000527733 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
USP47-207ENST00000527733 C3orf67Q6ZVT6 689 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 FAM178BQ8IXR5 827 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 IGDCC4Q8TDY8 1250 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
USP47-207ENST00000527733 CTNNBL1Q8WYA6 563 aaPredicted RBP16.74■□□□□ 0.27
USP47-207ENST00000527733 IMPACTQ9P2X3 320 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 FEM1BQ9UK73 627 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 ADAMTSL3P82987 1691 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 RASA3Q14644 834 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 DPP9Q86TI2 863 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 PSMD14O00487 310 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 CTNNA2P26232 953 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 MAP9Q49MG5 647 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 ZNF771Q7L3S4 317 aaPredicted RBP16.74■□□□□ 0.27
USP47-207ENST00000527733 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
USP47-207ENST00000527733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP47-207ENST00000527733 GNA14O95837 355 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 SNAP25P60880 206 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 DEPTORQ8TB45 409 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 LMBR1Q8WVP7 490 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 MTMR4Q9NYA4 1195 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 HOXA13P31271 388 aaPredicted RBP16.73■□□□□ 0.27
USP47-207ENST00000527733 FAM102BQ5T8I3 360 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 ATP6V0A1Q93050 837 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 STK17AQ9UEE5 414 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 PRPHP41219 470 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 TXNRD3Q86VQ6 643 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 CEP83Q9Y592 693 aa16.73■□□□□ 0.27
USP47-207ENST00000527733 CDC25AP30304 524 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 KRT9P35527 623 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 KIF22Q14807 665 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 PRIMPOLQ96LW4 560 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 NRBP2Q9NSY0 501 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 ZNF70Q9UC06 446 aaPredicted RBP16.72■□□□□ 0.27
USP47-207ENST00000527733 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 ERCC3P19447 782 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 FAM151AQ8WW52 585 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 CRACR2AQ9BSW2 395 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 XPO4Q9C0E2 1151 aaKnown RBP16.72■□□□□ 0.27
USP47-207ENST00000527733 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 H0YCG3 227 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 LZTFL1Q9NQ48 299 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 BARHL2Q9NY43 387 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 GUCA1BQ9UMX6 200 aa16.72■□□□□ 0.27
USP47-207ENST00000527733 GOLGA5Q8TBA6 731 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 SORBS3O60504 671 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 MYL1P05976 194 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 MORC3Q14149 939 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 SPATA1Q5VX52 437 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 PTF1AQ7RTS3 328 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 PRPF38AQ8NAV1 312 aaKnown RBP16.71■□□□□ 0.27
USP47-207ENST00000527733 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 CENPHQ9H3R5 247 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms