RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DDX19AQ9NUU7 478 aaKnown RBP21.49■■□□□ 1.03
SMPD1-203ENST00000527275 LOC285556D6RIA3 1793 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 RLFQ13129 1914 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 PARP14Q460N5 1801 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 NR1I2O75469 434 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 YEATS4O95619 227 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 TAL1P17542 331 aaPredicted RBP21.48■■□□□ 1.03
SMPD1-203ENST00000527275 FSTL1Q12841 308 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 SAFBQ15424 915 aaKnown RBP eCLIP21.48■■□□□ 1.03
SMPD1-203ENST00000527275 USH1GQ495M9 461 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 FBXO11Q86XK2 927 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 CCDC148Q8NFR7 591 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 SLC38A10Q9HBR0 1119 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 AGTPBP1Q9UPW5 1226 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 TLL2Q9Y6L7 1015 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 ADAMTS3O15072 1205 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 HOXA7P31268 230 aaPredicted RBP21.48■■□□□ 1.03
SMPD1-203ENST00000527275 SF3A1Q15459 793 aaKnown RBP21.48■■□□□ 1.03
SMPD1-203ENST00000527275 ANO1Q5XXA6 986 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 CCAR1Q8IX12 1150 aaKnown RBP21.48■■□□□ 1.03
SMPD1-203ENST00000527275 KCNG4Q8TDN1 519 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 CCDC12Q8WUD4 166 aaPredicted RBP21.48■■□□□ 1.03
SMPD1-203ENST00000527275 ZMYND12Q9H0C1 365 aa21.48■■□□□ 1.03
SMPD1-203ENST00000527275 ABT1Q9ULW3 272 aaKnown RBP21.48■■□□□ 1.03
SMPD1-203ENST00000527275 TMEM88BA6NKF7 163 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 VWA5AO00534 786 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 DSG3P32926 999 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 GTF2A2P52657 109 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 NR5A1Q13285 461 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 RGMBQ6NW40 437 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 HOXC10Q9NYD6 342 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 PCDHA7Q9UN72 937 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 ZNF536O15090 1300 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 SMCO2A6NFE2 343 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 CAMK4Q16566 473 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 GPAT2Q6NUI2 795 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 ANP32BQ92688 251 aaKnown RBP21.47■■□□□ 1.03
SMPD1-203ENST00000527275 ADAMTS5Q9UNA0 930 aa21.47■■□□□ 1.03
SMPD1-203ENST00000527275 SPDYE16A6NNV3 312 aaPredicted RBP21.46■■□□□ 1.03
SMPD1-203ENST00000527275 SPTLC2O15270 562 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 CETPP11597 493 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 CALML3P27482 149 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 RASAL3Q86YV0 1011 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 CPXCR1Q8N123 301 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 RNF214Q8ND24 703 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 CCL15-CCL14A0A0B4J2E2 113 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 KRT2P35908 639 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 CCL15Q16663 113 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 ADALQ6DHV7 355 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 FAM177A1Q8N128 213 aaPredicted RBP21.46■■□□□ 1.03
SMPD1-203ENST00000527275 AGBL1Q96MI9 1066 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 TNMDQ9H2S6 317 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 FOXP1Q9H334 677 aaPredicted RBP21.46■■□□□ 1.03
SMPD1-203ENST00000527275 CLSTN2Q9H4D0 955 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 PCDHA4Q9UN74 947 aa21.46■■□□□ 1.03
SMPD1-203ENST00000527275 PCNTO95613 3336 aa21.45■■□□□ 1.02
SMPD1-203ENST00000527275 ICAM1P05362 532 aa21.45■■□□□ 1.02
SMPD1-203ENST00000527275 NOSTRINQ8IVI9 506 aa21.45■■□□□ 1.02
SMPD1-203ENST00000527275 BRI3BPQ8WY22 251 aa21.45■■□□□ 1.02
SMPD1-203ENST00000527275 FUCA2Q9BTY2 467 aa21.45■■□□□ 1.02
SMPD1-203ENST00000527275 ASCC2Q9H1I8 757 aaPredicted RBP21.45■■□□□ 1.02
SMPD1-203ENST00000527275 RAVER2Q9HCJ3 691 aaKnown RBP21.45■■□□□ 1.02
SMPD1-203ENST00000527275 ESYT2A0FGR8 921 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 ZBED4O75132 1171 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 IRX3P78415 501 aaPredicted RBP21.44■■□□□ 1.02
SMPD1-203ENST00000527275 BLIDQ8IZY5 108 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 P2RX7Q99572 595 aaKnown RBP21.44■■□□□ 1.02
SMPD1-203ENST00000527275 BRMS1Q9HCU9 246 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 C6orf50Q9HD87 102 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 MYPNQ86TC9 1320 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 FDX1P10109 184 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 GNA11P29992 359 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 SLC39A14Q15043 492 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 GALNT17Q6IS24 598 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 PPP1R18Q6NYC8 613 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 POTEEQ6S8J3 1075 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 CCDC73Q6ZRK6 1079 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 RASGRP4Q8TDF6 673 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 GOLPH3LQ9H4A5 285 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 CCPG1Q9ULG6 757 aa21.44■■□□□ 1.02
SMPD1-203ENST00000527275 CTDP1Q9Y5B0 961 aaPredicted RBP21.44■■□□□ 1.02
SMPD1-203ENST00000527275 A0A1W2PQ27 194 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 A0A1W2PQ64 194 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 A0A1W2PQD8 194 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 REPS2Q8NFH8 660 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 PSTPIP2Q9H939 334 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 BTBD19C9JJ37 291 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 ADCY7P51828 1080 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 FSIP1Q8NA03 581 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 DAGLBQ8NCG7 672 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 TNFRSF25Q93038 417 aa21.43■■□□□ 1.02
SMPD1-203ENST00000527275 COL11A1P12107 1806 aaPredicted RBP21.42■■□□□ 1.02
SMPD1-203ENST00000527275 M0R2N6 131 aa21.42■■□□□ 1.02
SMPD1-203ENST00000527275 TRAF1Q13077 416 aa21.42■■□□□ 1.02
SMPD1-203ENST00000527275 PABPC4Q13310 644 aaKnown RBP eCLIP21.42■■□□□ 1.02
SMPD1-203ENST00000527275 TMEM132BQ14DG7 1078 aa21.42■■□□□ 1.02
SMPD1-203ENST00000527275 NOM1Q5C9Z4 860 aaKnown RBP21.42■■□□□ 1.02
SMPD1-203ENST00000527275 EARS2Q5JPH6 523 aaKnown RBP21.42■■□□□ 1.02
SMPD1-203ENST00000527275 RIC8AQ9NPQ8 531 aa21.42■■□□□ 1.02
SMPD1-203ENST00000527275 ZNF214Q9UL59 606 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms