RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 FAM53CQ9NYF3 392 aa19.77■□□□□ 0.76
USH1C-205ENST00000527020 ATP6V0A2Q9Y487 856 aa19.77■□□□□ 0.76
USH1C-205ENST00000527020 MRFAP1Q9Y605 127 aa19.77■□□□□ 0.76
USH1C-205ENST00000527020 MYH4Q9Y623 1939 aa19.77■□□□□ 0.76
USH1C-205ENST00000527020 EDIL3O43854 480 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 SNHG28P0DPA3 235 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 ARHGAP29Q52LW3 1261 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 SOGA3Q5TF21 947 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 JAKMIP3Q5VZ66 844 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 REXO1Q8N1G1 1221 aaKnown RBP19.77■□□□□ 0.75
USH1C-205ENST00000527020 COA1Q9GZY4 146 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 MAGEF1Q9HAY2 307 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 ABHD10Q9NUJ1 306 aa19.77■□□□□ 0.75
USH1C-205ENST00000527020 F8W031 263 aaPredicted RBP19.76■□□□□ 0.75
USH1C-205ENST00000527020 ZSCAN20P17040 1043 aaPredicted RBP19.76■□□□□ 0.75
USH1C-205ENST00000527020 SEMA3FQ13275 785 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 TTI2Q6NXR4 508 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 TMC4Q7Z404 712 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 LRRC47Q8N1G4 583 aaKnown RBP19.76■□□□□ 0.75
USH1C-205ENST00000527020 ANKRD20A12PQ8NF67 263 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 TRIM9Q9C026 710 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 LZTFL1Q9NQ48 299 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 TECP42680 631 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 DPP8Q6V1X1 898 aaPredicted RBP19.76■□□□□ 0.75
USH1C-205ENST00000527020 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 CREBRFQ8IUR6 639 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 PROM2Q8N271 834 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 MNS1Q8NEH6 495 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 MXD3Q9BW11 206 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 SUGT1Q9Y2Z0 365 aa19.76■□□□□ 0.75
USH1C-205ENST00000527020 EFCAB8A8MWE9 144 aa19.75■□□□□ 0.75
USH1C-205ENST00000527020 ASPRV1Q53RT3 343 aa19.75■□□□□ 0.75
USH1C-205ENST00000527020 ZNF507Q8TCN5 953 aa19.75■□□□□ 0.75
USH1C-205ENST00000527020 COA7Q96BR5 231 aa19.75■□□□□ 0.75
USH1C-205ENST00000527020 DUSP9Q99956 384 aaKnown RBP19.75■□□□□ 0.75
USH1C-205ENST00000527020 C7orf25Q9BPX7 421 aa19.75■□□□□ 0.75
USH1C-205ENST00000527020 THAP9Q9H5L6 903 aa19.75■□□□□ 0.75
USH1C-205ENST00000527020 COL11A2P13942 1736 aaPredicted RBP19.75■□□□□ 0.75
USH1C-205ENST00000527020 TRIM37O94972 964 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 CLCN6P51797 869 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 EIF6P56537 245 aaKnown RBP19.74■□□□□ 0.75
USH1C-205ENST00000527020 UBXN1Q04323 297 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 ORC2Q13416 577 aaPredicted RBP19.74■□□□□ 0.75
USH1C-205ENST00000527020 TRIM14Q14142 442 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 UBXN4Q92575 508 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 MTMR9Q96QG7 549 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 LGALS16A8MUM7 142 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 hCG_1984214I3L0E3 225 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 PSMA7O14818 248 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 TPM1P09493 284 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 TMTC1Q8IUR5 882 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 ZNF713Q8N859 430 aaPredicted RBP19.74■□□□□ 0.75
USH1C-205ENST00000527020 ACRBPQ8NEB7 543 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 NUP88Q99567 741 aaPredicted RBP19.74■□□□□ 0.75
USH1C-205ENST00000527020 TTF2Q9UNY4 1162 aaKnown RBP19.74■□□□□ 0.75
USH1C-205ENST00000527020 MYH7BA7E2Y1 1941 aa19.74■□□□□ 0.75
USH1C-205ENST00000527020 EEF1GP26641 437 aaKnown RBP19.73■□□□□ 0.75
USH1C-205ENST00000527020 C10orf71Q711Q0 1435 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 MB21D1Q8N884 522 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 DHTKD1Q96HY7 919 aaPredicted RBP19.73■□□□□ 0.75
USH1C-205ENST00000527020 ZMYND15Q9H091 742 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 SIPA1L1O43166 1804 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 ABL1P00519 1130 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 SRGNP10124 158 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 SHMT1P34896 483 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 STK4Q13043 487 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 STIM1Q13586 685 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 TRIM47Q96LD4 638 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 GPCPD1Q9NPB8 672 aa19.73■□□□□ 0.75
USH1C-205ENST00000527020 SLC37A4O43826 429 aa19.72■□□□□ 0.75
USH1C-205ENST00000527020 PPP1R11O60927 126 aaPredicted RBP19.72■□□□□ 0.75
USH1C-205ENST00000527020 KRT9P35527 623 aa19.72■□□□□ 0.75
USH1C-205ENST00000527020 PPP2R3AQ06190 1150 aa19.72■□□□□ 0.75
USH1C-205ENST00000527020 USP40Q9NVE5 1235 aa19.72■□□□□ 0.75
USH1C-205ENST00000527020 SERPINB13Q9UIV8 391 aa19.72■□□□□ 0.75
USH1C-205ENST00000527020 ARFGEF1Q9Y6D6 1849 aa19.72■□□□□ 0.75
USH1C-205ENST00000527020 FCER1AP12319 257 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 TXKP42681 527 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 SCNN1DP51172 638 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 ADCY7P51828 1080 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 PDE4DQ08499 809 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 ZNF543Q08ER8 600 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 GRB10Q13322 594 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 CYP26C1Q6V0L0 522 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 RSRC2Q7L4I2 434 aaKnown RBP19.71■□□□□ 0.75
USH1C-205ENST00000527020 JMJD4Q9H9V9 463 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 A0A1W2PQC6 194 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 TTC26A0AVF1 554 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 TDP2O95551 362 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 TTLL1O95922 423 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 CCNE1P24864 410 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 ASIC1P78348 528 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 DOK7Q18PE1 504 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 CDC42EP5Q6NZY7 148 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 PNMA5Q96PV4 448 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 ZC3H12CQ9C0D7 883 aaKnown RBP19.71■□□□□ 0.75
USH1C-205ENST00000527020 BLOC1S4Q9NUP1 217 aa19.71■□□□□ 0.75
USH1C-205ENST00000527020 MYO3BQ8WXR4 1341 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 SLURP2P0DP57 97 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 ARHGAP25P42331 645 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms