RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 PCDHB15Q9Y5E8 787 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 SALL3Q9BXA9 1300 aa22.23■■□□□ 1.15
CAPN1-206ENST00000526966 NOVP48745 357 aa22.22■■□□□ 1.15
CAPN1-206ENST00000526966 IKQ13123 557 aaPredicted RBP22.22■■□□□ 1.15
CAPN1-206ENST00000526966 RCSD1Q6JBY9 416 aa22.22■■□□□ 1.15
CAPN1-206ENST00000526966 PSRC1Q6PGN9 363 aaPredicted RBP22.22■■□□□ 1.15
CAPN1-206ENST00000526966 TLK2Q86UE8 772 aa22.22■■□□□ 1.15
CAPN1-206ENST00000526966 PPP1R12CQ9BZL4 782 aa22.22■■□□□ 1.15
CAPN1-206ENST00000526966 STX8Q9UNK0 236 aa22.22■■□□□ 1.15
CAPN1-206ENST00000526966 TSPY2A6NKD2 308 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 CABYRO75952 493 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 ALAS1P13196 640 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 MX1P20591 662 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 KCTD1Q719H9 257 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 RASGRP2Q7LDG7 609 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 PBX4Q9BYU1 374 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 CYP39A1Q9NYL5 469 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 ANAPC4Q9UJX5 808 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 PRR12Q9ULL5 1215 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 CHD7Q9P2D1 2997 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 MUC3AQ02505 3323 aa22.21■■□□□ 1.15
CAPN1-206ENST00000526966 NMT2O60551 498 aa22.2■■□□□ 1.14
CAPN1-206ENST00000526966 CTDSPL2Q05D32 466 aa22.2■■□□□ 1.14
CAPN1-206ENST00000526966 MUM1L1Q5H9M0 696 aa22.2■■□□□ 1.14
CAPN1-206ENST00000526966 CXCL17Q6UXB2 119 aa22.2■■□□□ 1.14
CAPN1-206ENST00000526966 CCDC129Q6ZRS4 1044 aa22.2■■□□□ 1.14
CAPN1-206ENST00000526966 ZNF365Q70YC5 407 aa22.2■■□□□ 1.14
CAPN1-206ENST00000526966 USP38Q8NB14 1042 aa22.2■■□□□ 1.14
CAPN1-206ENST00000526966 SMPD1P17405 629 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 FSCN1Q16658 493 aaKnown RBP22.19■■□□□ 1.14
CAPN1-206ENST00000526966 TAPT1Q6NXT6 567 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 MORC4Q8TE76 937 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 CHMP4CQ96CF2 233 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 SEZ6LQ9BYH1 1024 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 IL23AQ9NPF7 189 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 INCENPQ9NQS7 918 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 DDX49Q9Y6V7 483 aaKnown RBP22.19■■□□□ 1.14
CAPN1-206ENST00000526966 GRIN2DO15399 1336 aa22.19■■□□□ 1.14
CAPN1-206ENST00000526966 GRXCR1A8MXD5 290 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 ORC4O43929 436 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 FGRP09769 529 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 ACRP10323 421 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 PTGS1P23219 599 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 CYP2C18P33260 490 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 PBX2P40425 430 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 SNAP25P60880 206 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 NOL8Q76FK4 1167 aaKnown RBP22.18■■□□□ 1.14
CAPN1-206ENST00000526966 FBXO16Q8IX29 292 aaPredicted RBP22.18■■□□□ 1.14
CAPN1-206ENST00000526966 PDGFCQ9NRA1 345 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 Q9Y3F1 56 aa22.18■■□□□ 1.14
CAPN1-206ENST00000526966 ICAM1P05362 532 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 ITGA7Q13683 1181 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 VPS53Q5VIR6 699 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 IQSEC1Q6DN90 963 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 DCAF4Q8WV16 495 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 HERVK_113Q902F9 699 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 AP5M1Q9H0R1 490 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 RANBP17Q9H2T7 1088 aaKnown RBP22.17■■□□□ 1.14
CAPN1-206ENST00000526966 HIPK3Q9H422 1215 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 VTA1Q9NP79 307 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 CCPG1Q9ULG6 757 aa22.17■■□□□ 1.14
CAPN1-206ENST00000526966 NCOR1O75376 2440 aa22.16■■□□□ 1.14
CAPN1-206ENST00000526966 UMODL1Q5DID0 1318 aa22.16■■□□□ 1.14
CAPN1-206ENST00000526966 DYNC1LI2O43237 492 aaPredicted RBP22.16■■□□□ 1.14
CAPN1-206ENST00000526966 ALX1Q15699 326 aa22.16■■□□□ 1.14
CAPN1-206ENST00000526966 BTNL9Q6UXG8 535 aa22.16■■□□□ 1.14
CAPN1-206ENST00000526966 SYMPKQ92797 1274 aaKnown RBP22.16■■□□□ 1.14
CAPN1-206ENST00000526966 ZEB2O60315 1214 aa22.15■■□□□ 1.14
CAPN1-206ENST00000526966 RANBP6O60518 1105 aaKnown RBP22.15■■□□□ 1.14
CAPN1-206ENST00000526966 TMEM63BQ5T3F8 832 aa22.15■■□□□ 1.14
CAPN1-206ENST00000526966 NSMFQ6X4W1 530 aa22.15■■□□□ 1.14
CAPN1-206ENST00000526966 EEPD1Q7L9B9 569 aa22.15■■□□□ 1.14
CAPN1-206ENST00000526966 PURBQ96QR8 312 aaKnown RBP22.15■■□□□ 1.14
CAPN1-206ENST00000526966 NOC4LQ9BVI4 516 aaKnown RBP22.15■■□□□ 1.14
CAPN1-206ENST00000526966 CXXC1Q9P0U4 656 aaPredicted RBP22.15■■□□□ 1.14
CAPN1-206ENST00000526966 SCN10AQ9Y5Y9 1956 aa22.15■■□□□ 1.14
CAPN1-206ENST00000526966 LOC102724159A0A0B4J2E5 919 aa22.14■■□□□ 1.13
CAPN1-206ENST00000526966 B4GALT4O60513 344 aa22.14■■□□□ 1.13
CAPN1-206ENST00000526966 PWP2Q15269 919 aaKnown RBP22.14■■□□□ 1.13
CAPN1-206ENST00000526966 RAB30Q15771 203 aa22.14■■□□□ 1.13
CAPN1-206ENST00000526966 CCDC96Q2M329 555 aa22.14■■□□□ 1.13
CAPN1-206ENST00000526966 EVI5LQ96CN4 794 aa22.14■■□□□ 1.13
CAPN1-206ENST00000526966 GAS2L1Q99501 681 aaPredicted RBP22.14■■□□□ 1.13
CAPN1-206ENST00000526966 WNT8AQ9H1J5 351 aa22.14■■□□□ 1.13
CAPN1-206ENST00000526966 FGBP02675 491 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 DUSP28Q4G0W2 176 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 TJAP1Q5JTD0 557 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 TTBK2Q6IQ55 1244 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 TRPV6Q9H1D0 765 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 MTIF3Q9H2K0 278 aaKnown RBP22.13■■□□□ 1.13
CAPN1-206ENST00000526966 PRDM12Q9H4Q4 367 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 HELLSQ9NRZ9 838 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 MTMR7Q9Y216 660 aa22.13■■□□□ 1.13
CAPN1-206ENST00000526966 SLC16A2P36021 539 aa22.12■■□□□ 1.13
CAPN1-206ENST00000526966 ALDH5A1P51649 535 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-206ENST00000526966 PSMC6P62333 389 aa22.12■■□□□ 1.13
CAPN1-206ENST00000526966 BAATQ14032 418 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-206ENST00000526966 AKNAD1Q5T1N1 836 aa22.12■■□□□ 1.13
CAPN1-206ENST00000526966 SYDE2Q5VT97 1194 aa22.12■■□□□ 1.13
CAPN1-206ENST00000526966 KIAA1211Q6ZU35 1233 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms