RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 AMNQ9BXJ7 453 aa15.84■□□□□ 0.13
CD44-224ENST00000526669 TEX13BQ9BXU2 312 aa15.84■□□□□ 0.13
CD44-224ENST00000526669 EFCC1Q9HA90 598 aa15.84■□□□□ 0.13
CD44-224ENST00000526669 RNF146Q9NTX7 359 aa15.84■□□□□ 0.13
CD44-224ENST00000526669 WBP1LQ9NX94 342 aa15.84■□□□□ 0.13
CD44-224ENST00000526669 SMC3Q9UQE7 1217 aa15.84■□□□□ 0.13
CD44-224ENST00000526669 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
CD44-224ENST00000526669 ZNF236Q9UL36 1845 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 STXBP3O00186 592 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 HSP90AA1P07900 732 aaKnown RBP15.83■□□□□ 0.12
CD44-224ENST00000526669 ERCC3P19447 782 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 OAZ1P54368 228 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 NAPAP54920 295 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 RIOX2Q8IUF8 465 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 SHISA4Q96DD7 197 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 ALG1Q9BT22 464 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 CWC22Q9HCG8 908 aaKnown RBP15.83■□□□□ 0.12
CD44-224ENST00000526669 GJB4Q9NTQ9 266 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 SAGE1Q9NXZ1 904 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 VPS54Q9P1Q0 977 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.83■□□□□ 0.12
CD44-224ENST00000526669 TCHHQ07283 1943 aa15.83■□□□□ 0.12
CD44-224ENST00000526669 NFIBO00712 420 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 ATP2A1O14983 1001 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 CCNA1P78396 465 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 HMGN5P82970 282 aaKnown RBP15.82■□□□□ 0.12
CD44-224ENST00000526669 GUCY1B3Q02153 619 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 CCAR1Q8IX12 1150 aaKnown RBP15.82■□□□□ 0.12
CD44-224ENST00000526669 FAM184AQ8NB25 1140 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 CFHR5Q9BXR6 569 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 ARHGAP39Q9C0H5 1083 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 RBM27Q9P2N5 1060 aaKnown RBP15.82■□□□□ 0.12
CD44-224ENST00000526669 ABCB11O95342 1321 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 DOCK5Q9H7D0 1870 aa15.82■□□□□ 0.12
CD44-224ENST00000526669 LRRC37A2A6NM11 1700 aa15.81■□□□□ 0.12
CD44-224ENST00000526669 GPR25O00155 361 aa15.81■□□□□ 0.12
CD44-224ENST00000526669 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
CD44-224ENST00000526669 CD99L2Q8TCZ2 262 aa15.81■□□□□ 0.12
CD44-224ENST00000526669 TBC1D5Q92609 795 aa15.81■□□□□ 0.12
CD44-224ENST00000526669 ACAD9Q9H845 621 aa15.81■□□□□ 0.12
CD44-224ENST00000526669 BARHL2Q9NY43 387 aa15.81■□□□□ 0.12
CD44-224ENST00000526669 MRPL11Q9Y3B7 192 aaKnown RBP15.81■□□□□ 0.12
CD44-224ENST00000526669 SLC25A27O95847 323 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 CTGFP29279 349 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 CAP1Q01518 475 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 SP3Q02447 781 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 TKFCQ3LXA3 575 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 JMYQ8N9B5 988 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 CLEC4DQ8WXI8 215 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 KCNJ14Q9UNX9 436 aa15.8■□□□□ 0.12
CD44-224ENST00000526669 hCG_1984214I3L0E3 225 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 OPLAHO14841 1288 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 CFBP00751 764 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 HSPA1AP0DMV8 641 aaKnown RBP15.79■□□□□ 0.12
CD44-224ENST00000526669 HSPA1BP0DMV9 641 aaKnown RBP15.79■□□□□ 0.12
CD44-224ENST00000526669 UBE2SQ16763 222 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 GPR142Q7Z601 462 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 ZNF713Q8N859 430 aaPredicted RBP15.79■□□□□ 0.12
CD44-224ENST00000526669 SHCBP1Q8NEM2 672 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 CHST13Q8NET6 341 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 WASF1Q92558 559 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 INTS4Q96HW7 963 aaKnown RBP15.79■□□□□ 0.12
CD44-224ENST00000526669 MMP19Q99542 508 aa15.79■□□□□ 0.12
CD44-224ENST00000526669 SMCO2A6NFE2 343 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 FOXN1O15353 648 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 FKTNO75072 461 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 MAPK4P31152 587 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 HOXA13P31271 388 aaPredicted RBP15.78■□□□□ 0.12
CD44-224ENST00000526669 COPB2P35606 906 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 PSMC4P43686 418 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 NLRP5P59047 1200 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 LACTBP83111 547 aaPredicted RBP15.78■□□□□ 0.12
CD44-224ENST00000526669 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 SLC30A10Q6XR72 485 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 PLEKHH3Q7Z736 793 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 CCDC148Q8NFR7 591 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 ZNF296Q8WUU4 475 aaPredicted RBP15.78■□□□□ 0.12
CD44-224ENST00000526669 C8orf76Q96K31 380 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 MROH8Q9H579 483 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 A1CFQ9NQ94 594 aaKnown RBP15.78■□□□□ 0.12
CD44-224ENST00000526669 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
CD44-224ENST00000526669 TNPO2O14787 897 aaKnown RBP15.77■□□□□ 0.12
CD44-224ENST00000526669 CALML3P27482 149 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 ADCY7P51828 1080 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 TRAF1Q13077 416 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 BAATQ14032 418 aaPredicted RBP15.77■□□□□ 0.12
CD44-224ENST00000526669 KIF22Q14807 665 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 KRT40Q6A162 431 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 ANKRD35Q8N283 1001 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 RASGRP4Q8TDF6 673 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 CCDC12Q8WUD4 166 aaPredicted RBP15.77■□□□□ 0.12
CD44-224ENST00000526669 TRIM47Q96LD4 638 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 PURBQ96QR8 312 aaKnown RBP15.77■□□□□ 0.12
CD44-224ENST00000526669 FBXO40Q9UH90 709 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 IVNS1ABPQ9Y6Y0 642 aa15.77■□□□□ 0.12
CD44-224ENST00000526669 PGK2P07205 417 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 HSPA8P11142 646 aaKnown RBP15.76■□□□□ 0.11
CD44-224ENST00000526669 FCER1AP12319 257 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms