RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 LRRC2Q9BYS8 371 aa20.13■□□□□ 0.81
CCS-204ENST00000526066 VCPKMTQ9H867 229 aa20.13■□□□□ 0.81
CCS-204ENST00000526066 TMX2Q9Y320 296 aa20.13■□□□□ 0.81
CCS-204ENST00000526066 UNC80Q8N2C7 3258 aa20.13■□□□□ 0.81
CCS-204ENST00000526066 RAD21O60216 631 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 ST18O60284 1047 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 COPB2P35606 906 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 EVCP57679 992 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 TOB2Q14106 344 aaPredicted RBP20.12■□□□□ 0.81
CCS-204ENST00000526066 C9orf50Q5SZB4 431 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 C1orf53Q5VUE5 145 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 TMEM47Q9BQJ4 181 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 SEMA6BQ9H3T3 888 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 GOPCQ9HD26 462 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 GPHNQ9NQX3 736 aaPredicted RBP20.12■□□□□ 0.81
CCS-204ENST00000526066 CLIP2Q9UDT6 1046 aa20.12■□□□□ 0.81
CCS-204ENST00000526066 ZNFX1Q9P2E3 1918 aaKnown RBP20.12■□□□□ 0.81
CCS-204ENST00000526066 DNAH12Q6ZR08 3092 aa20.11■□□□□ 0.81
CCS-204ENST00000526066 CLTBP09497 229 aa20.11■□□□□ 0.81
CCS-204ENST00000526066 AK2P54819 239 aa20.11■□□□□ 0.81
CCS-204ENST00000526066 TLE2Q04725 743 aa20.11■□□□□ 0.81
CCS-204ENST00000526066 RNPC3Q96LT9 517 aaKnown RBP20.11■□□□□ 0.81
CCS-204ENST00000526066 KAT14Q9H8E8 782 aa20.11■□□□□ 0.81
CCS-204ENST00000526066 PHF24Q9UPV7 400 aa20.11■□□□□ 0.81
CCS-204ENST00000526066 CNPY2Q9Y2B0 182 aa20.11■□□□□ 0.81
CCS-204ENST00000526066 FOSL2P15408 326 aa20.1■□□□□ 0.81
CCS-204ENST00000526066 RAG1P15918 1043 aa20.1■□□□□ 0.81
CCS-204ENST00000526066 BRF1Q92994 677 aa20.1■□□□□ 0.81
CCS-204ENST00000526066 SENP2Q9HC62 589 aa20.1■□□□□ 0.81
CCS-204ENST00000526066 PLXNA1Q9UIW2 1896 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 COL11A1P12107 1806 aaPredicted RBP20.09■□□□□ 0.81
CCS-204ENST00000526066 PARP14Q460N5 1801 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 CCDC69A6NI79 296 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 MCM2P49736 904 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 RCAN1P53805 252 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 TMEM132BQ14DG7 1078 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 KIAA1755Q5JYT7 1200 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 PNMA1Q8ND90 353 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 TINF2Q9BSI4 451 aa20.09■□□□□ 0.81
CCS-204ENST00000526066 TMEM265A0A087WTH1 108 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 TRIM43BA6NCK2 446 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 PQBP1O60828 265 aaKnown RBP20.08■□□□□ 0.81
CCS-204ENST00000526066 PGK2P07205 417 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 AKR1A1P14550 325 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 FPGSQ05932 587 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 SH3RF1Q7Z6J0 888 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 CATIPQ7Z7H3 387 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 RIOX2Q8IUF8 465 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 LRRC47Q8N1G4 583 aaKnown RBP20.08■□□□□ 0.81
CCS-204ENST00000526066 GMCL1P1Q8NEA9 526 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 MYLIPQ8WY64 445 aa20.08■□□□□ 0.81
CCS-204ENST00000526066 TRIM43Q96BQ3 446 aaPredicted RBP20.08■□□□□ 0.81
CCS-204ENST00000526066 DIS3Q9Y2L1 958 aaKnown RBP20.08■□□□□ 0.81
CCS-204ENST00000526066 DCDC2CA8MYV0 355 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 DDAH1O94760 285 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 PGK1P00558 417 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 STAT3P40763 770 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 APOBRQ0VD83 1088 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 APOA5Q6Q788 366 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 SYNE3Q6ZMZ3 975 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 ZNF654Q8IZM8 581 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 ZNF274Q96GC6 653 aaPredicted RBP20.07■□□□□ 0.8
CCS-204ENST00000526066 MAP3K14Q99558 947 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 TMEM39AQ9NV64 488 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 SLC12A7Q9Y666 1083 aa20.07■□□□□ 0.8
CCS-204ENST00000526066 KLF18A0A0U1RQI7 1052 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 A0A1W2PQ45 241 aaPredicted RBP20.06■□□□□ 0.8
CCS-204ENST00000526066 A0A1W2PQY0 241 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 SMCHD1A6NHR9 2005 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 CALM1P0DP23 149 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 CALM2P0DP24 149 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 CALM3P0DP25 149 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 TROAPQ12815 778 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 SYMPKQ92797 1274 aaKnown RBP20.06■□□□□ 0.8
CCS-204ENST00000526066 SNX21Q969T3 373 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 PPP1R9AQ9ULJ8 1098 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 LIMCH1Q9UPQ0 1083 aa20.06■□□□□ 0.8
CCS-204ENST00000526066 CTDP1Q9Y5B0 961 aaPredicted RBP20.06■□□□□ 0.8
CCS-204ENST00000526066 F5H6K3 240 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 VWA5AO00534 786 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 KIAA0355O15063 1070 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 SNHG28P0DPA3 235 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 KLRC3Q07444 240 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 CCDC174Q6PII3 467 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 GMCL1Q96IK5 515 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 STARD7Q9NQZ5 370 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 TSHZ2Q9NRE2 1034 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 FBXO28Q9NVF7 368 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 TPCN1Q9ULQ1 816 aa20.05■□□□□ 0.8
CCS-204ENST00000526066 ZBTB43O43298 467 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 NDUFB10O96000 172 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 PDHBP11177 359 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 PDIA3P30101 505 aaKnown RBP20.04■□□□□ 0.8
CCS-204ENST00000526066 PPP2R5BQ15173 497 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 ZNF792Q3KQV3 632 aa20.04■□□□□ 0.8
CCS-204ENST00000526066 FAM83BQ5T0W9 1011 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms