RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 NOP2P46087 812 aaKnown RBP7.33□□□□□ -1.24
CSDE1-210ENST00000525878 CORO7P57737 925 aa7.33□□□□□ -1.24
CSDE1-210ENST00000525878 PAQR3Q6TCH7 311 aa7.33□□□□□ -1.24
CSDE1-210ENST00000525878 FIBCD1Q8N539 461 aa7.33□□□□□ -1.24
CSDE1-210ENST00000525878 FERD3LQ96RJ6 166 aa7.33□□□□□ -1.24
CSDE1-210ENST00000525878 PDLIM7Q9NR12 457 aa7.33□□□□□ -1.24
CSDE1-210ENST00000525878 ZNF214Q9UL59 606 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-210ENST00000525878 A0A087WZG4 1122 aa7.32□□□□□ -1.24
CSDE1-210ENST00000525878 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
CSDE1-210ENST00000525878 ZNF200P98182 395 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-210ENST00000525878 NOL9Q5SY16 702 aaKnown RBP7.32□□□□□ -1.24
CSDE1-210ENST00000525878 RUFY4Q6ZNE9 571 aa7.32□□□□□ -1.24
CSDE1-210ENST00000525878 PPT2Q9UMR5 302 aa7.32□□□□□ -1.24
CSDE1-210ENST00000525878 PCDHGB7Q9Y5F8 929 aa7.32□□□□□ -1.24
CSDE1-210ENST00000525878 FFAR3O14843 346 aa7.31□□□□□ -1.24
CSDE1-210ENST00000525878 CBFA2T2O43439 604 aa7.31□□□□□ -1.24
CSDE1-210ENST00000525878 TP53P04637 393 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-210ENST00000525878 SKOR2Q2VWA4 1001 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-210ENST00000525878 LSRQ86X29 649 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-210ENST00000525878 JAMLQ86YT9 394 aa7.31□□□□□ -1.24
CSDE1-210ENST00000525878 SYT8Q8NBV8 401 aa7.31□□□□□ -1.24
CSDE1-210ENST00000525878 PTCHD1Q96NR3 888 aa7.31□□□□□ -1.24
CSDE1-210ENST00000525878 LTBP3Q9NS15 1303 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 A0A1W2PQ27 194 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 A0A1W2PQ64 194 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 A0A1W2PQC6 194 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 A0A1W2PQD8 194 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 ITGA4P13612 1032 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 IFNGR1P15260 489 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 PFKLP17858 780 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 KRTAP10-2P60368 255 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 TARBP2Q15633 366 aaKnown RBP7.3□□□□□ -1.24
CSDE1-210ENST00000525878 DDX41Q9UJV9 622 aaKnown RBP7.3□□□□□ -1.24
CSDE1-210ENST00000525878 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 DIS3Q9Y2L1 958 aaKnown RBP7.3□□□□□ -1.24
CSDE1-210ENST00000525878 SF3B6Q9Y3B4 125 aaKnown RBP7.3□□□□□ -1.24
CSDE1-210ENST00000525878 HCFC2Q9Y5Z7 792 aa7.3□□□□□ -1.24
CSDE1-210ENST00000525878 LIMS1P48059 325 aa7.29□□□□□ -1.24
CSDE1-210ENST00000525878 POU4F1Q01851 419 aa7.29□□□□□ -1.24
CSDE1-210ENST00000525878 VWA3BQ502W6 1294 aa7.29□□□□□ -1.24
CSDE1-210ENST00000525878 TEPSINQ96N21 525 aa7.29□□□□□ -1.24
CSDE1-210ENST00000525878 NOL6Q9H6R4 1146 aaKnown RBP7.29□□□□□ -1.24
CSDE1-210ENST00000525878 ZC3H12DA2A288 527 aaKnown RBP7.28□□□□□ -1.24
CSDE1-210ENST00000525878 TBC1D8O95759 1140 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 ATF2P15336 505 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 L1CAMP32004 1257 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 COL9A2Q14055 689 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-210ENST00000525878 RCSD1Q6JBY9 416 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 FRMD5Q7Z6J6 570 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 ZDHHC14Q8IZN3 488 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 NLGN1Q8N2Q7 840 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 RNF34Q969K3 372 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 MCMBPQ9BTE3 642 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 RNF38Q9H0F5 515 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 JAG2Q9Y219 1238 aa7.28□□□□□ -1.24
CSDE1-210ENST00000525878 PLA2G1BP04054 148 aaKnown RBP7.27□□□□□ -1.25
CSDE1-210ENST00000525878 CD3EP07766 207 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 GLI4P10075 376 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 HTRA3P83110 453 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 PRR5P85299 388 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 TCEAL1Q15170 157 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 FBXW10Q5XX13 1052 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 BICRALQ6AI39 1079 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 FNIP1Q8TF40 1166 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 HAUS7Q99871 368 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 FAM86C1Q9NVL1 165 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 WHRNQ9P202 907 aa7.27□□□□□ -1.25
CSDE1-210ENST00000525878 AURKAO14965 403 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 SOX9P48436 509 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 SLURP1P55000 103 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 FOXO4P98177 505 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 NFKB2Q00653 900 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 ZDHHC15Q96MV8 337 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 KLHL25Q9H0H3 589 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 ADAM7Q9H2U9 754 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 GINM1Q9NU53 330 aa7.26□□□□□ -1.25
CSDE1-210ENST00000525878 A0A1W2PQJ5 194 aa7.25□□□□□ -1.25
CSDE1-210ENST00000525878 F8W031 263 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-210ENST00000525878 CELA3BP08861 270 aa7.25□□□□□ -1.25
CSDE1-210ENST00000525878 TACR1P25103 407 aa7.25□□□□□ -1.25
CSDE1-210ENST00000525878 EEF1DP3Q658K8 133 aa7.25□□□□□ -1.25
CSDE1-210ENST00000525878 SAPCD2Q86UD0 394 aa7.25□□□□□ -1.25
CSDE1-210ENST00000525878 C19orf47Q8N9M1 422 aaKnown RBP7.25□□□□□ -1.25
CSDE1-210ENST00000525878 SLC12A7Q9Y666 1083 aa7.25□□□□□ -1.25
CSDE1-210ENST00000525878 SH3D21A4FU49 640 aa7.24□□□□□ -1.25
CSDE1-210ENST00000525878 GIPRP48546 466 aa7.24□□□□□ -1.25
CSDE1-210ENST00000525878 KCNC1P48547 511 aa7.24□□□□□ -1.25
CSDE1-210ENST00000525878 DLX2Q07687 328 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-210ENST00000525878 CCDC81Q6ZN84 652 aa7.24□□□□□ -1.25
CSDE1-210ENST00000525878 RGS22Q8NE09 1264 aa7.24□□□□□ -1.25
CSDE1-210ENST00000525878 TSPAN17Q96FV3 270 aa7.24□□□□□ -1.25
CSDE1-210ENST00000525878 PHAXQ9H814 394 aaKnown RBP7.24□□□□□ -1.25
CSDE1-210ENST00000525878 RECKO95980 971 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 ASGR2P07307 311 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 NCAM1P13591 858 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 VAMP1P23763 118 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 PAK2Q13177 524 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 PPP2R5DQ14738 602 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 ZFYVE27Q5T4F4 411 aa7.23□□□□□ -1.25
CSDE1-210ENST00000525878 LIPIQ6XZB0 460 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms