RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 RGS9O75916 674 aaPredicted RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 SASH1O94885 1247 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 SGPL1O95470 568 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 PSAPP07602 524 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 MCCP23508 829 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 GTF2A2P52657 109 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 RPS8P62241 208 aaKnown RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 GPLD1P80108 840 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 CCL15Q16663 113 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 DHX32Q7L7V1 743 aaKnown RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 KRT25Q7Z3Z0 450 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 FAM35AQ86V20 835 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 CMTR1Q8N1G2 835 aaKnown RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 MAFAQ8NHW3 353 aaPredicted RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 PNISRQ8TF01 805 aaKnown RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 U2AF1L4Q8WU68 220 aaKnown RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 CELF1Q92879 486 aaKnown RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 OPTNQ96CV9 577 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 TRIM11Q96F44 468 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 FAM161BQ96MY7 647 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 GDF15Q99988 308 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 ARHGAP39Q9C0H5 1083 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 DEFB129Q9H1M3 183 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 TMEM51Q9NW97 253 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 CHMP5Q9NZZ3 219 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 FRRS1LQ9P0K9 344 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 ZMYND8Q9ULU4 1186 aaPredicted RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 RIPOR2Q9Y4F9 1068 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 COL1A1P02452 1464 aaPredicted RBP6.01□□□□□ -1.45
CD44-218ENST00000525469 LAMA3Q16787 3333 aa6□□□□□ -1.45
CD44-218ENST00000525469 KRBA1A5PL33 1030 aa6□□□□□ -1.45
CD44-218ENST00000525469 MYO1BO43795 1136 aa6□□□□□ -1.45
CD44-218ENST00000525469 TLR2O60603 784 aa6□□□□□ -1.45
CD44-218ENST00000525469 APPP05067 770 aa6□□□□□ -1.45
CD44-218ENST00000525469 RPLP1P05386 114 aaKnown RBP6□□□□□ -1.45
CD44-218ENST00000525469 ZSCAN20P17040 1043 aaPredicted RBP6□□□□□ -1.45
CD44-218ENST00000525469 MCM4P33991 863 aa6□□□□□ -1.45
CD44-218ENST00000525469 PSMC4P43686 418 aa6□□□□□ -1.45
CD44-218ENST00000525469 NRLP54845 237 aa6□□□□□ -1.45
CD44-218ENST00000525469 FAM109BQ6ICB4 259 aaPredicted RBP6□□□□□ -1.45
CD44-218ENST00000525469 PSAPL1Q6NUJ1 521 aa6□□□□□ -1.45
CD44-218ENST00000525469 NECAB2Q7Z6G3 386 aa6□□□□□ -1.45
CD44-218ENST00000525469 NLRP10Q86W26 655 aa6□□□□□ -1.45
CD44-218ENST00000525469 FAM9BQ8IZU0 186 aa6□□□□□ -1.45
CD44-218ENST00000525469 ELP3Q9H9T3 547 aa6□□□□□ -1.45
CD44-218ENST00000525469 MIS18AQ9NYP9 233 aa6□□□□□ -1.45
CD44-218ENST00000525469 STIM2Q9P246 746 aa6□□□□□ -1.45
CD44-218ENST00000525469 SRRDQ9UH36 339 aa6□□□□□ -1.45
CD44-218ENST00000525469 RCAN3Q9UKA8 241 aa6□□□□□ -1.45
CD44-218ENST00000525469 STARD13Q9Y3M8 1113 aa6□□□□□ -1.45
CD44-218ENST00000525469 PPP2R3BQ9Y5P8 575 aa6□□□□□ -1.45
CD44-218ENST00000525469 MYO9BQ13459 2157 aa6□□□□□ -1.45
CD44-218ENST00000525469 MYPNQ86TC9 1320 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 OTOFQ9HC10 1997 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 UQCRHLA0A096LP55 91 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 UQCRHP07919 91 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 PCSK2P16519 638 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 SYN1P17600 705 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 PRKAR2BP31323 418 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 SOX18P35713 384 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 MAGEA10P43363 369 aaPredicted RBP5.99□□□□□ -1.45
CD44-218ENST00000525469 PLAURQ03405 335 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 AIMP1Q12904 312 aaKnown RBP5.99□□□□□ -1.45
CD44-218ENST00000525469 DCTN1Q14203 1278 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 RALBP1Q15311 655 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 SF3B3Q15393 1217 aaKnown RBP5.99□□□□□ -1.45
CD44-218ENST00000525469 DLGAP5Q15398 846 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 CC2D1BQ5T0F9 858 aaKnown RBP5.99□□□□□ -1.45
CD44-218ENST00000525469 ELMSAN1Q6PJG2 1045 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 C20orf204Q6ZNR8 217 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 TTC16Q8NEE8 873 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 PAWRQ96IZ0 340 aaKnown RBP5.99□□□□□ -1.45
CD44-218ENST00000525469 PHACTR3Q96KR7 559 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 GUCD1Q96NT3 240 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 THUMPD2Q9BTF0 503 aaKnown RBP5.99□□□□□ -1.45
CD44-218ENST00000525469 CCDC39Q9UFE4 941 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 NOL7Q9UMY1 257 aaKnown RBP5.99□□□□□ -1.45
CD44-218ENST00000525469 CSADQ9Y600 493 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 DOCK3Q8IZD9 2030 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 FAM205AQ6ZU69 1335 aa5.99□□□□□ -1.45
CD44-218ENST00000525469 AK9Q5TCS8 1911 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 DLG5Q8TDM6 1919 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 PATL2C9JE40 543 aaKnown RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 OPLAHO14841 1288 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 HTATSF1O43719 755 aaKnown RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 USP2O75604 605 aaPredicted RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 SASH3O75995 380 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 GHRHP01286 108 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 CETPP11597 493 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 NID1P14543 1247 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 CPB1P15086 417 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 EIF2AK2P19525 551 aaKnown RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 EIF2S2P20042 333 aaKnown RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 GTF2F1P35269 517 aaKnown RBP eCLIP5.98□□□□□ -1.45
CD44-218ENST00000525469 ZAP70P43403 619 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 MAP3K12Q12852 859 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 CHAF1AQ13111 956 aaPredicted RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 NAA30Q147X3 362 aaPredicted RBP5.98□□□□□ -1.45
CD44-218ENST00000525469 STRIP1Q5VSL9 837 aa5.98□□□□□ -1.45
CD44-218ENST00000525469 TTLL5Q6EMB2 1281 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms