RNA–Protein interactions for RNA: ENST00000525083.5

FOXRED1-203, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,228 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-203ENST00000525083 EXOSC10Q01780 885 aaKnown RBP20.35■□□□□ 0.85
FOXRED1-203ENST00000525083 CTCFLQ8NI51 663 aaPredicted RBP20.35■□□□□ 0.85
FOXRED1-203ENST00000525083 CRISPLD2Q9H0B8 497 aa20.35■□□□□ 0.85
FOXRED1-203ENST00000525083 CYP39A1Q9NYL5 469 aa20.35■□□□□ 0.85
FOXRED1-203ENST00000525083 SLC35G1Q2M3R5 365 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 HOMER1Q86YM7 354 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 CCDC144CPQ8IYA2 1237 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 FAM133AQ8N9E0 248 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 CLEC4DQ8WXI8 215 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 FGD4Q96M96 766 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 USP26Q9BXU7 913 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 SLC12A7Q9Y666 1083 aa20.34■□□□□ 0.85
FOXRED1-203ENST00000525083 MYH6P13533 1939 aa20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 PTPDC1A2A3K4 754 aa20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 FARP2O94887 1054 aaPredicted RBP20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 HMGB1P09429 215 aaKnown RBP20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 BAATQ14032 418 aaPredicted RBP20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 LHX8Q68G74 356 aa20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 FBXO11Q86XK2 927 aa20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 PURBQ96QR8 312 aaKnown RBP20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 DDX20Q9UHI6 824 aaKnown RBP20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 CNPY2Q9Y2B0 182 aa20.33■□□□□ 0.85
FOXRED1-203ENST00000525083 ABCB11O95342 1321 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 TNRC18O15417 2968 aaPredicted RBP20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 SOWAHBA6NEL2 793 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 EPB41L2O43491 1005 aaKnown RBP20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 CYTH3O43739 400 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 CALML3P27482 149 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 KIF5BP33176 963 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 ANO1Q5XXA6 986 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 SLC30A10Q6XR72 485 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 RNF207Q6ZRF8 634 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 ZNF467Q7Z7K2 595 aaPredicted RBP20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 MSL3Q8N5Y2 521 aaKnown RBP20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 PIBF1Q8WXW3 757 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 PIGSQ96S52 555 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 MAP3K14Q99558 947 aa20.32■□□□□ 0.84
FOXRED1-203ENST00000525083 SYNGAP1Q96PV0 1343 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 BAZ2BQ9UIF8 2168 aaKnown RBP20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 ZBTB5O15062 677 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 SNAI1O95863 264 aaPredicted RBP20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 CALM1P0DP23 149 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 CALM2P0DP24 149 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 CALM3P0DP25 149 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 FGD1P98174 961 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 BLOC1S2Q6QNY1 142 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 MAMDC4Q6UXC1 1216 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 SYNE3Q6ZMZ3 975 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 ARMCX2Q7L311 632 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 SGMS1Q86VZ5 419 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 MICU3Q86XE3 530 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 DIS3LQ8TF46 1054 aaKnown RBP20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 MTMR8Q96EF0 704 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 AMNQ9BXJ7 453 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 RIOX1Q9H6W3 641 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 ZHX1Q9UKY1 873 aaPredicted RBP20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 OGDHLQ9ULD0 1010 aa20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 DDX49Q9Y6V7 483 aaKnown RBP20.31■□□□□ 0.84
FOXRED1-203ENST00000525083 ASTN1O14525 1302 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 MCM3APO60318 1980 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 FRMPD3Q5JV73 1810 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 LCTP09848 1927 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 SEPT4O43236 478 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 MSCO60682 206 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 PPP1R11O60927 126 aaPredicted RBP20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 PLEKHA8P1O95397 391 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 CMTR1Q8N1G2 835 aaKnown RBP20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 NRBP1Q9UHY1 535 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 BRPF3Q9ULD4 1205 aa20.3■□□□□ 0.84
FOXRED1-203ENST00000525083 MKI67P46013 3256 aaKnown RBP20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 ZNF865P0CJ78 1059 aaPredicted RBP20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 CAPN2P17655 700 aa20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 PSMA5P28066 241 aa20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 RPS6P62753 249 aaKnown RBP20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 APOA5Q6Q788 366 aa20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 Q6ZUG5 572 aa20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 UBE2Q1Q7Z7E8 422 aa20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 TBC1D5Q92609 795 aa20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 PAWRQ96IZ0 340 aaKnown RBP20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 MRPL11Q9Y3B7 192 aaKnown RBP20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 PCDHA1Q9Y5I3 950 aa20.29■□□□□ 0.84
FOXRED1-203ENST00000525083 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 ASB14A6NK59 587 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 RPS6KB1P23443 525 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 GNAQP50148 359 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 CCDC82Q8N4S0 544 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 SRBD1Q8N5C6 995 aaKnown RBP20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 ANKLE1Q8NAG6 615 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 FANCBQ8NB91 859 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 SPZ1Q9BXG8 430 aa20.28■□□□□ 0.84
FOXRED1-203ENST00000525083 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
FOXRED1-203ENST00000525083 ZBTB43O43298 467 aa20.27■□□□□ 0.84
FOXRED1-203ENST00000525083 MYCNP04198 464 aaPredicted RBP20.27■□□□□ 0.84
FOXRED1-203ENST00000525083 MNX1P50219 401 aaPredicted RBP20.27■□□□□ 0.84
FOXRED1-203ENST00000525083 ALDH5A1P51649 535 aaPredicted RBP20.27■□□□□ 0.84
FOXRED1-203ENST00000525083 ACVR2BQ13705 512 aa20.27■□□□□ 0.84
FOXRED1-203ENST00000525083 BRF1Q92994 677 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms