RNA–Protein interactions for RNA: ENST00000524998.1

RECQL4-202, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-202ENST00000524998 TIMP1P01033 207 aa23.25■■□□□ 1.31
RECQL4-202ENST00000524998 ICAM1P05362 532 aa23.25■■□□□ 1.31
RECQL4-202ENST00000524998 HSPD1P10809 573 aaKnown RBP23.25■■□□□ 1.31
RECQL4-202ENST00000524998 SLC16A2P36021 539 aa23.25■■□□□ 1.31
RECQL4-202ENST00000524998 IRX5P78411 483 aaPredicted RBP23.25■■□□□ 1.31
RECQL4-202ENST00000524998 NMIQ13287 307 aaPredicted RBP23.25■■□□□ 1.31
RECQL4-202ENST00000524998 MUM1L1Q5H9M0 696 aa23.25■■□□□ 1.31
RECQL4-202ENST00000524998 SYDE2Q5VT97 1194 aa23.25■■□□□ 1.31
RECQL4-202ENST00000524998 CYP39A1Q9NYL5 469 aa23.25■■□□□ 1.31
RECQL4-202ENST00000524998 MCM3APO60318 1980 aa23.25■■□□□ 1.31
RECQL4-202ENST00000524998 FGRP09769 529 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 EPHB4P54760 987 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 HAND2P61296 217 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 BEX3Q00994 111 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 B4GALNT3Q6L9W6 998 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 MFSD6Q6ZSS7 791 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 RASGRP2Q7LDG7 609 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 TLK2Q86UE8 772 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 TMEM47Q9BQJ4 181 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 KATNBL1Q9H079 304 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 SEMA6BQ9H3T3 888 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 GPCPD1Q9NPB8 672 aa23.24■■□□□ 1.31
RECQL4-202ENST00000524998 ADD3Q9UEY8 706 aaKnown RBP23.24■■□□□ 1.31
RECQL4-202ENST00000524998 CABYRO75952 493 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 PCP11498 1178 aaKnown RBP23.23■■□□□ 1.31
RECQL4-202ENST00000524998 NOVP48745 357 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 CDK7P50613 346 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 IQSEC1Q6DN90 963 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 EEPD1Q7L9B9 569 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 YTHDC1Q96MU7 727 aaKnown RBP23.23■■□□□ 1.31
RECQL4-202ENST00000524998 CDX2Q99626 313 aaPredicted RBP23.23■■□□□ 1.31
RECQL4-202ENST00000524998 RNF41Q9H4P4 317 aaPredicted RBP23.23■■□□□ 1.31
RECQL4-202ENST00000524998 TCP11L1Q9NUJ3 509 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 TBX21Q9UL17 535 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 PNMA2Q9UL42 364 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 FRMPD2Q68DX3 1309 aaPredicted RBP23.23■■□□□ 1.31
RECQL4-202ENST00000524998 CCDC171Q6TFL3 1326 aa23.23■■□□□ 1.31
RECQL4-202ENST00000524998 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.22■■□□□ 1.31
RECQL4-202ENST00000524998 DYNC1LI2O43237 492 aaPredicted RBP23.22■■□□□ 1.31
RECQL4-202ENST00000524998 PPIGQ13427 754 aaKnown RBP eCLIP23.22■■□□□ 1.312e-10■■■■■ 31.9
RECQL4-202ENST00000524998 FSCN1Q16658 493 aaKnown RBP23.22■■□□□ 1.31
RECQL4-202ENST00000524998 TTBK2Q6IQ55 1244 aa23.22■■□□□ 1.31
RECQL4-202ENST00000524998 MFSD5Q6N075 450 aa23.22■■□□□ 1.31
RECQL4-202ENST00000524998 ZNF589Q86UQ0 364 aaPredicted RBP23.22■■□□□ 1.31
RECQL4-202ENST00000524998 TMEM199Q8N511 208 aa23.22■■□□□ 1.31
RECQL4-202ENST00000524998 RANBP17Q9H2T7 1088 aaKnown RBP23.22■■□□□ 1.31
RECQL4-202ENST00000524998 ZMYM6O95789 1325 aa23.22■■□□□ 1.31
RECQL4-202ENST00000524998 PTPDC1A2A3K4 754 aa23.21■■□□□ 1.31
RECQL4-202ENST00000524998 AKNAD1Q5T1N1 836 aa23.21■■□□□ 1.31
RECQL4-202ENST00000524998 CXCL17Q6UXB2 119 aa23.21■■□□□ 1.31
RECQL4-202ENST00000524998 BTNL9Q6UXG8 535 aa23.21■■□□□ 1.31
RECQL4-202ENST00000524998 FBXO16Q8IX29 292 aaPredicted RBP23.21■■□□□ 1.31
RECQL4-202ENST00000524998 VTA1Q9NP79 307 aa23.21■■□□□ 1.31
RECQL4-202ENST00000524998 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.2■■□□□ 1.3
RECQL4-202ENST00000524998 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.2■■□□□ 1.3
RECQL4-202ENST00000524998 SMPD1P17405 629 aa23.2■■□□□ 1.3
RECQL4-202ENST00000524998 NKX3-2P78367 333 aa23.2■■□□□ 1.3
RECQL4-202ENST00000524998 BAATQ14032 418 aaPredicted RBP23.2■■□□□ 1.3
RECQL4-202ENST00000524998 KIAA1211Q6ZU35 1233 aa23.2■■□□□ 1.3
RECQL4-202ENST00000524998 TTC14Q96N46 770 aa23.2■■□□□ 1.3
RECQL4-202ENST00000524998 MPHOSPH6Q99547 160 aaKnown RBP23.2■■□□□ 1.3
RECQL4-202ENST00000524998 PPP1R12CQ9BZL4 782 aa23.2■■□□□ 1.3
RECQL4-202ENST00000524998 GNEQ9Y223 722 aaKnown RBP23.2■■□□□ 1.3
RECQL4-202ENST00000524998 UNC80Q8N2C7 3258 aa23.2■■□□□ 1.3
RECQL4-202ENST00000524998 CTAGE5O15320 804 aa23.19■■□□□ 1.3
RECQL4-202ENST00000524998 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.19■■□□□ 1.3
RECQL4-202ENST00000524998 FAM126BQ8IXS8 530 aa23.19■■□□□ 1.3
RECQL4-202ENST00000524998 ESR2Q92731 530 aa23.19■■□□□ 1.3
RECQL4-202ENST00000524998 PDGFCQ9NRA1 345 aa23.19■■□□□ 1.3
RECQL4-202ENST00000524998 DIAPH3Q9NSV4 1193 aa23.19■■□□□ 1.3
RECQL4-202ENST00000524998 Q9Y3F1 56 aa23.19■■□□□ 1.3
RECQL4-202ENST00000524998 DDX49Q9Y6V7 483 aaKnown RBP23.19■■□□□ 1.3
RECQL4-202ENST00000524998 ASTN1O14525 1302 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 TMEM265A0A087WTH1 108 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 ZNF213O14771 459 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 PDHBP11177 359 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 SDSP20132 328 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 CHD1LQ86WJ1 897 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 SMC5Q8IY18 1101 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 MAFAQ8NHW3 353 aaPredicted RBP23.18■■□□□ 1.3
RECQL4-202ENST00000524998 SEZ6LQ9BYH1 1024 aa23.18■■□□□ 1.3
RECQL4-202ENST00000524998 NFIBO00712 420 aa23.17■■□□□ 1.3
RECQL4-202ENST00000524998 CSF2RAP15509 400 aa23.17■■□□□ 1.3
RECQL4-202ENST00000524998 CALML3P27482 149 aa23.17■■□□□ 1.3
RECQL4-202ENST00000524998 ZNF543Q08ER8 600 aa23.17■■□□□ 1.3
RECQL4-202ENST00000524998 ITGA7Q13683 1181 aa23.17■■□□□ 1.3
RECQL4-202ENST00000524998 TAPT1Q6NXT6 567 aa23.17■■□□□ 1.3
RECQL4-202ENST00000524998 MYLIPQ8WY64 445 aa23.17■■□□□ 1.3
RECQL4-202ENST00000524998 PURBQ96QR8 312 aaKnown RBP23.17■■□□□ 1.3
RECQL4-202ENST00000524998 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.17■■□□□ 1.33e-9■■■□□ 16.4
RECQL4-202ENST00000524998 TTYH1Q9H313 450 aaPredicted RBP23.17■■□□□ 1.3
RECQL4-202ENST00000524998 LOC102724159A0A0B4J2E5 919 aa23.16■■□□□ 1.3
RECQL4-202ENST00000524998 FOSL2P15408 326 aa23.16■■□□□ 1.3
RECQL4-202ENST00000524998 ALDH5A1P51649 535 aaPredicted RBP23.16■■□□□ 1.3
RECQL4-202ENST00000524998 PWP2Q15269 919 aaKnown RBP23.16■■□□□ 1.3
RECQL4-202ENST00000524998 PSRC1Q6PGN9 363 aaPredicted RBP23.16■■□□□ 1.3
RECQL4-202ENST00000524998 CWC27Q6UX04 472 aaKnown RBP23.16■■□□□ 1.3
RECQL4-202ENST00000524998 RNF207Q6ZRF8 634 aa23.16■■□□□ 1.3
RECQL4-202ENST00000524998 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
RECQL4-202ENST00000524998 B4DLN1 442 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms