RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 PUF60Q9UHX1 559 aaKnown RBP9.32□□□□□ -0.92
CHD7-202ENST00000524602 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
CHD7-202ENST00000524602 LDHBP07195 334 aaKnown RBP9.31□□□□□ -0.92
CHD7-202ENST00000524602 TSPY3P0CV98 308 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 TSPY8P0CW00 308 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 SRGNP10124 158 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 TTI2Q6NXR4 508 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 WDR93Q6P2C0 686 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 TPTE2Q6XPS3 522 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 NBPF5PQ86XG9 351 aaPredicted RBP9.31□□□□□ -0.92
CHD7-202ENST00000524602 CCDC170Q8IYT3 715 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 GPKOWQ92917 476 aaPredicted RBP eCLIP9.31□□□□□ -0.92
CHD7-202ENST00000524602 ZMYND12Q9H0C1 365 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 MKNK2Q9HBH9 465 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
CHD7-202ENST00000524602 A0A0U1RQJ8 604 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 ONECUT3O60422 494 aaPredicted RBP9.31□□□□□ -0.92
CHD7-202ENST00000524602 LDHCP07864 332 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 USP17L8P0C7I0 530 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 VEGFAP15692 232 aaPredicted RBP9.31□□□□□ -0.92
CHD7-202ENST00000524602 CDK17Q00537 523 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 AMPD3Q01432 767 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 EVX2Q03828 476 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 FIGNQ5HY92 759 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 ATRIPQ8WXE1 791 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 TRIM47Q96LD4 638 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 SLF1Q9BQI6 1058 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 EXOC1Q9NV70 894 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 TFCP2L1Q9NZI6 479 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 LEMD3Q9Y2U8 911 aa9.31□□□□□ -0.92
CHD7-202ENST00000524602 A0A1W2PQJ5 194 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 RNF225M0QZC1 329 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 ADAMTS3O15072 1205 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 POLR3GO15318 223 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 CYLC1P35663 651 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 TRAPPC11Q7Z392 1133 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 ZNF444Q8N0Y2 327 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 C7orf25Q9BPX7 421 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 ZNHIT6Q9NWK9 470 aaKnown RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 TRPC5Q9UL62 973 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 L1RE1Q9UN81 338 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 DDX60LQ5H9U9 1706 aaKnown RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 hCG_1984214I3L0E3 225 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 OR52Z1P0C646 297 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 CCNE1P24864 410 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 GNA11P29992 359 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 CDC25AP30304 524 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 IRX3P78415 501 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 C15orf52Q6ZUT6 534 aaKnown RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 ZNF713Q8N859 430 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 TTYH3Q9C0H2 523 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 TNRC6CQ9HCJ0 1690 aaKnown RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 FLT1P17948 1338 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 CDK5RAP2Q96SN8 1893 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 KRT86O43790 486 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 TNNT3P45378 269 aaPredicted RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 CKAP4Q07065 602 aaKnown RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 INF2Q27J81 1249 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 MUM1L1Q5H9M0 696 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 PAPD7Q5XG87 772 aaKnown RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 HEATR3Q7Z4Q2 680 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 P2RX5Q93086 422 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 PNKPQ96T60 521 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 TMEM60Q9H2L4 133 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 LRRC4BQ9NT99 713 aa9.3□□□□□ -0.92
CHD7-202ENST00000524602 REXO2Q9Y3B8 237 aaKnown RBP9.3□□□□□ -0.92
CHD7-202ENST00000524602 ANO9A1A5B4 782 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 TRIM49BA6NDI0 452 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 COBLO75128 1261 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 IPO7O95373 1038 aaKnown RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 ZBED6P86452 979 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 NONOQ15233 471 aaKnown RBP eCLIP9.29□□□□□ -0.92
CHD7-202ENST00000524602 FAM196AQ6ZSG2 479 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 CABP7Q86V35 215 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 ZSCAN29Q8IWY8 852 aaPredicted RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 CSGALNACT2Q8N6G5 542 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 CHP1Q99653 195 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 TUBGCP2Q9BSJ2 902 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 TSGA10Q9BZW7 698 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 C6orf50Q9HD87 102 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 MAPK8IP1Q9UQF2 711 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 TARSL2A2RTX5 802 aaKnown RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 EIF3CLB5ME19 914 aaKnown RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 CYTH3O43739 400 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 PMS1P54277 932 aaKnown RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 CNNM4Q6P4Q7 775 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 SAMD1Q6SPF0 538 aaPredicted RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 RASGRP4Q8TDF6 673 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 ERGIC2Q96RQ1 377 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 EIF3CQ99613 913 aaKnown RBP9.29□□□□□ -0.92
CHD7-202ENST00000524602 TRIM9Q9C026 710 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 VIPAS39Q9H9C1 493 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 BRWD3Q6RI45 1802 aa9.29□□□□□ -0.92
CHD7-202ENST00000524602 ABCB11O95342 1321 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms