RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	TLR3	O15455	904 aa	Known RBP	18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	NT5C2	P49902	561 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	HAND2	P61296	217 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	CHD1L	Q86WJ1	897 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	ESR2	Q92731	530 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	TMEM47	Q9BQJ4	181 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	AP5M1	Q9H0R1	490 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	DIAPH3	Q9NSV4	1193 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	CYP39A1	Q9NYL5	469 aa		18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	ADD3	Q9UEY8	706 aa	Known RBP	18.44	■□□□□ 0.54
CDK16-222	ENST00000523699	HIP1	O00291	1037 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	ADCY6	O43306	1168 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	ZEB2	O60315	1214 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	SMAD3	P84022	425 aa	Known RBP	18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	FAAP100	Q0VG06	881 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	MUM1L1	Q5H9M0	696 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	AKNAD1	Q5T1N1	836 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	TLK2	Q86UE8	772 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	FAM161B	Q96MY7	647 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	MPHOSPH6	Q99547	160 aa	Known RBP	18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	KATNBL1	Q9H079	304 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	GPCPD1	Q9NPB8	672 aa		18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.43	■□□□□ 0.54
CDK16-222	ENST00000523699	CABYR	O75952	493 aa		18.42	■□□□□ 0.54
CDK16-222	ENST00000523699	SDS	P20132	328 aa		18.42	■□□□□ 0.54
CDK16-222	ENST00000523699	SLC16A2	P36021	539 aa		18.42	■□□□□ 0.54
CDK16-222	ENST00000523699	BTNL9	Q6UXG8	535 aa		18.42	■□□□□ 0.54
CDK16-222	ENST00000523699	TTC14	Q96N46	770 aa		18.42	■□□□□ 0.54
CDK16-222	ENST00000523699	VTA1	Q9NP79	307 aa		18.42	■□□□□ 0.54
CDK16-222	ENST00000523699	PTPDC1	A2A3K4	754 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	ARVCF	O00192	962 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	ZNF213	O14771	459 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	TIMP1	P01033	207 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	PDHB	P11177	359 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	ITGB8	P26012	769 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	NUCB1	Q02818	461 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	FSCN1	Q16658	493 aa	Known RBP	18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	TTBK2	Q6IQ55	1244 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	TBC1D10C	Q8IV04	446 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	FBXO16	Q8IX29	292 aa	Predicted RBP	18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	TBX21	Q9UL17	535 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	DNAH12	Q6ZR08	3092 aa		18.41	■□□□□ 0.54
CDK16-222	ENST00000523699	LOC102724159	A0A0B4J2E5	919 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	NKX3-2	P78367	333 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	ZNF543	Q08ER8	600 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	PPIG	Q13427	754 aa	Known RBP eCLIP	18.4	■□□□□ 0.54	4e-7	■■□□□ 11.8
CDK16-222	ENST00000523699	PWP2	Q15269	919 aa	Known RBP	18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	CCDC178	Q5BJE1	867 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	GPATCH4	Q5T3I0	446 aa	Known RBP	18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	EEPD1	Q7L9B9	569 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	IQCA1	Q86XH1	822 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	SEZ6L	Q9BYH1	1024 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	OSBPL3	Q9H4L5	887 aa		18.4	■□□□□ 0.54
CDK16-222	ENST00000523699	IRX5	P78411	483 aa	Predicted RBP	18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	BEX3	Q00994	111 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	BAAT	Q14032	418 aa	Predicted RBP	18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	IQSEC1	Q6DN90	963 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	MFSD5	Q6N075	450 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	CWC27	Q6UX04	472 aa	Known RBP	18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	PLEKHM2	Q8IWE5	1019 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	TMEM199	Q8N511	208 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	GUCD1	Q96NT3	240 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	GNE	Q9Y223	722 aa	Known RBP	18.39	■□□□□ 0.53
CDK16-222	ENST00000523699		Q9Y3F1	56 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	NEDD4	P46934	1319 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	WDR19	Q8NEZ3	1342 aa		18.39	■□□□□ 0.53
CDK16-222	ENST00000523699	TMEM265	A0A087WTH1	108 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	DLL1	O00548	723 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	NFIB	O00712	420 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	DYNC1LI2	O43237	492 aa	Predicted RBP	18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	SMPD1	P17405	629 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	CALML3	P27482	149 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	CDK7	P50613	346 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	ALDH5A1	P51649	535 aa	Predicted RBP	18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	EPHB4	P54760	987 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	CXCL17	Q6UXB2	119 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	RNF207	Q6ZRF8	634 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	KIAA1211	Q6ZU35	1233 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	FAM126B	Q8IXS8	530 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	ASTN1	O14525	1302 aa		18.38	■□□□□ 0.53
CDK16-222	ENST00000523699	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.37	■□□□□ 0.53
CDK16-222	ENST00000523699		B4DLN1	442 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	CTAGE5	O15320	804 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	SNHG28	P0DPA3	235 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	MRPL12	P52815	198 aa	Known RBP	18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	IMMT	Q16891	758 aa	Known RBP	18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	DGKH	Q86XP1	1220 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	EXOC6	Q8TAG9	804 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	MORC4	Q8TE76	937 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	PPP1R12C	Q9BZL4	782 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	KAT14	Q9H8E8	782 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	CTNNA3	Q9UI47	895 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	RAD50	Q92878	1312 aa		18.37	■□□□□ 0.53
CDK16-222	ENST00000523699	PDE4D	Q08499	809 aa		18.36	■□□□□ 0.53
CDK16-222	ENST00000523699	BRDT	Q58F21	947 aa	Predicted RBP	18.36	■□□□□ 0.53
CDK16-222	ENST00000523699	TAPT1	Q6NXT6	567 aa		18.36	■□□□□ 0.53
CDK16-222	ENST00000523699	SLC30A10	Q6XR72	485 aa		18.36	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms