RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CCDC47Q96A33 483 aaKnown RBP20.03■□□□□ 0.8
IKBKB-228ENST00000523517 TUBGCP2Q9BSJ2 902 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 SPZ1Q9BXG8 430 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 EXOC1Q9NV70 894 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 LEMD3Q9Y2U8 911 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 H3BQF6 201 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 MEA1Q16626 185 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 TRIM9Q9C026 710 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 L1RE1Q9UN81 338 aa20.03■□□□□ 0.8
IKBKB-228ENST00000523517 BICDL2A1A5D9 508 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 TUBBP07437 444 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 LDHCP07864 332 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 CCNE1P24864 410 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 NONOQ15233 471 aaKnown RBP eCLIP20.02■□□□□ 0.8
IKBKB-228ENST00000523517 FAM98CQ17RN3 349 aaKnown RBP20.02■□□□□ 0.8
IKBKB-228ENST00000523517 LETM2Q2VYF4 491 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 NCAPH2Q6IBW4 605 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 TRAPPC11Q7Z392 1133 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 SLC51AQ86UW1 340 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 NOA1Q8NC60 698 aaKnown RBP20.02■□□□□ 0.8
IKBKB-228ENST00000523517 C7orf25Q9BPX7 421 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 NUP58Q9BVL2 599 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 CPVLQ9H3G5 476 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 CALCOCO1Q9P1Z2 691 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 CCNT1O60563 726 aaKnown RBP20.02■□□□□ 0.8
IKBKB-228ENST00000523517 VSNL1P62760 191 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 KRT83P78385 493 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 PDE4DQ08499 809 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 TTYH3Q9C0H2 523 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 ZNF287Q9HBT7 754 aa20.02■□□□□ 0.8
IKBKB-228ENST00000523517 CASZ1Q86V15 1759 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 SMCO2A6NFE2 343 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 RASSF10A6NK89 507 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 MCM6Q14566 821 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 ANKRD40Q6AI12 368 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 ZNF662Q6ZS27 426 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 MSL3Q8N5Y2 521 aaKnown RBP20.01■□□□□ 0.79
IKBKB-228ENST00000523517 RETREG2Q8NC44 543 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 GBP3Q9H0R5 595 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 C6orf50Q9HD87 102 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 TBC1D8BQ0IIM8 1120 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 STK4Q13043 487 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 GPS2Q13227 327 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 CCDC122Q5T0U0 273 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 TXLNBQ8N3L3 684 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 RTFDC1Q9BY42 306 aaPredicted RBP20.01■□□□□ 0.79
IKBKB-228ENST00000523517 AGPAT5Q9NUQ2 364 aa20.01■□□□□ 0.79
IKBKB-228ENST00000523517 TRIM21P19474 475 aaKnown RBP20■□□□□ 0.79
IKBKB-228ENST00000523517 GNA11P29992 359 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 ASIC1P78348 528 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 GRAPQ13588 217 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 ZNF804AQ7Z570 1209 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 NEK8Q86SG6 692 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 FAM114A1Q8IWE2 563 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 GRAPLQ8TC17 118 aaPredicted RBP20■□□□□ 0.79
IKBKB-228ENST00000523517 CNOT6LQ96LI5 555 aaKnown RBP20■□□□□ 0.79
IKBKB-228ENST00000523517 EYA3Q99504 573 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 PDE11AQ9HCR9 933 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 ZNHIT6Q9NWK9 470 aaKnown RBP20■□□□□ 0.79
IKBKB-228ENST00000523517 PPP1R2P41236 205 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 CDK8P49336 464 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 NEK11Q8NG66 645 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 RRP36Q96EU6 259 aaKnown RBP20■□□□□ 0.79
IKBKB-228ENST00000523517 EEF2KMTQ96G04 330 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 TFR2Q9UP52 801 aa20■□□□□ 0.79
IKBKB-228ENST00000523517 RTCBQ9Y3I0 505 aaKnown RBP20■□□□□ 0.79
IKBKB-228ENST00000523517 CYLC1P35663 651 aaPredicted RBP19.99■□□□□ 0.79
IKBKB-228ENST00000523517 TECP42680 631 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 KLK7P49862 253 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 ZBED6P86452 979 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 NFIXQ14938 502 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 C16orf86Q6ZW13 317 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 KIAA1328Q86T90 577 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 NEDD1Q8NHV4 660 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 ARHGEF1Q92888 912 aaKnown RBP19.99■□□□□ 0.79
IKBKB-228ENST00000523517 SUGCTQ9HAC7 445 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 HDAC6Q9UBN7 1215 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 ENC1O14682 589 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 MTIF2P46199 727 aaKnown RBP19.99■□□□□ 0.79
IKBKB-228ENST00000523517 GYS2P54840 703 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 HNRNPH2P55795 449 aaKnown RBP19.99■□□□□ 0.79
IKBKB-228ENST00000523517 AMPD3Q01432 767 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 SOGA3Q5TF21 947 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 PAPD7Q5XG87 772 aaKnown RBP19.99■□□□□ 0.79
IKBKB-228ENST00000523517 USP17L2Q6R6M4 530 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 AMIGO3Q86WK7 504 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 EHBP1Q8NDI1 1231 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 JAKMIP2Q96AA8 810 aa19.99■□□□□ 0.79
IKBKB-228ENST00000523517 COL24A1Q17RW2 1714 aa19.98■□□□□ 0.79
IKBKB-228ENST00000523517 EIF3JO75822 258 aaKnown RBP19.98■□□□□ 0.79
IKBKB-228ENST00000523517 ATP1A1P05023 1023 aaKnown RBP19.98■□□□□ 0.79
IKBKB-228ENST00000523517 FCER1AP12319 257 aa19.98■□□□□ 0.79
IKBKB-228ENST00000523517 BTDP43251 543 aa19.98■□□□□ 0.79
IKBKB-228ENST00000523517 WDR93Q6P2C0 686 aa19.98■□□□□ 0.79
IKBKB-228ENST00000523517 CERS3Q8IU89 383 aa19.98■□□□□ 0.79
IKBKB-228ENST00000523517 CCDC170Q8IYT3 715 aa19.98■□□□□ 0.79
IKBKB-228ENST00000523517 EXOC4Q96A65 974 aa19.98■□□□□ 0.79
IKBKB-228ENST00000523517 GPR101Q96P66 508 aaPredicted RBP19.98■□□□□ 0.79
IKBKB-228ENST00000523517 MMTAG2Q9BU76 263 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms