RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TLK2Q86UE8 772 aa30.79■■■□□ 2.52
PVT1-219ENST00000523427 FAM160B2Q86V87 743 aa30.79■■■□□ 2.52
PVT1-219ENST00000523427 STAG1Q8WVM7 1258 aa30.79■■■□□ 2.52
PVT1-219ENST00000523427 SYNPO2Q9UMS6 1093 aa30.79■■■□□ 2.52
PVT1-219ENST00000523427 STX8Q9UNK0 236 aa30.79■■■□□ 2.52
PVT1-219ENST00000523427 ZNF536O15090 1300 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 UMODL1Q5DID0 1318 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 CCL23P55773 120 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 CCDC85BQ15834 202 aaPredicted RBP30.78■■■□□ 2.52
PVT1-219ENST00000523427 LRRFIP1Q32MZ4 808 aaKnown RBP30.78■■■□□ 2.52
PVT1-219ENST00000523427 RASIP1Q5U651 963 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 FSD1Q9BTV5 496 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 HIPK3Q9H422 1215 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 IL23AQ9NPF7 189 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 PDGFCQ9NRA1 345 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 CXXC1Q9P0U4 656 aaPredicted RBP30.78■■■□□ 2.52
PVT1-219ENST00000523427 MSRAQ9UJ68 235 aa30.78■■■□□ 2.52
PVT1-219ENST00000523427 ASB14A6NK59 587 aa30.77■■■□□ 2.52
PVT1-219ENST00000523427 CD4P01730 458 aa30.77■■■□□ 2.52
PVT1-219ENST00000523427 IGFBP4P22692 258 aa30.77■■■□□ 2.52
PVT1-219ENST00000523427 ITGA7Q13683 1181 aa30.77■■■□□ 2.52
PVT1-219ENST00000523427 FSCN1Q16658 493 aaKnown RBP30.77■■■□□ 2.52
PVT1-219ENST00000523427 INCENPQ9NQS7 918 aa30.77■■■□□ 2.52
PVT1-219ENST00000523427 FGBP02675 491 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 SMPD1P17405 629 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 TMEM63BQ5T3F8 832 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 RASGRP2Q7LDG7 609 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 OTOP2Q7RTS6 562 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 FBXO16Q8IX29 292 aaPredicted RBP30.76■■■□□ 2.51
PVT1-219ENST00000523427 GMCL1Q96IK5 515 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 TRPV6Q9H1D0 765 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 NKX2-4Q9H2Z4 354 aa30.76■■■□□ 2.51
PVT1-219ENST00000523427 GNEQ9Y223 722 aaKnown RBP30.76■■■□□ 2.51
PVT1-219ENST00000523427 NMT2O60551 498 aa30.75■■■□□ 2.51
PVT1-219ENST00000523427 PSMC6P62333 389 aa30.75■■■□□ 2.51
PVT1-219ENST00000523427 CTDSPL2Q05D32 466 aa30.75■■■□□ 2.51
PVT1-219ENST00000523427 MUM1L1Q5H9M0 696 aa30.75■■■□□ 2.51
PVT1-219ENST00000523427 NSMFQ6X4W1 530 aa30.75■■■□□ 2.51
PVT1-219ENST00000523427 PURBQ96QR8 312 aaKnown RBP30.75■■■□□ 2.51
PVT1-219ENST00000523427 PLIN4Q96Q06 1357 aa30.75■■■□□ 2.51
PVT1-219ENST00000523427 TSPY2A6NKD2 308 aa30.74■■■□□ 2.51
PVT1-219ENST00000523427 TKFCQ3LXA3 575 aa30.74■■■□□ 2.51
PVT1-219ENST00000523427 OTUD7AQ8TE49 926 aaPredicted RBP30.74■■■□□ 2.51
PVT1-219ENST00000523427 HERVK_113Q902F9 699 aa30.74■■■□□ 2.51
PVT1-219ENST00000523427 PRR12Q9ULL5 1215 aa30.74■■■□□ 2.51
PVT1-219ENST00000523427 GRIN2DO15399 1336 aa30.73■■■□□ 2.51
PVT1-219ENST00000523427 ZEB2O60315 1214 aa30.73■■■□□ 2.51
PVT1-219ENST00000523427 CABYRO75952 493 aa30.73■■■□□ 2.51
PVT1-219ENST00000523427 NKX3-2P78367 333 aa30.73■■■□□ 2.51
PVT1-219ENST00000523427 ADGRE1Q14246 886 aa30.73■■■□□ 2.51
PVT1-219ENST00000523427 RAB30Q15771 203 aa30.73■■■□□ 2.51
PVT1-219ENST00000523427 RCSD1Q6JBY9 416 aa30.73■■■□□ 2.51
PVT1-219ENST00000523427 MTIF3Q9H2K0 278 aaKnown RBP30.73■■■□□ 2.51
PVT1-219ENST00000523427 SLC43A3Q8NBI5 491 aa30.72■■■□□ 2.51
PVT1-219ENST00000523427 CCPG1Q9ULG6 757 aa30.72■■■□□ 2.51
PVT1-219ENST00000523427 TNFRSF10AO00220 468 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 ERC2O15083 957 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 B4GALT4O60513 344 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 RABGGTBP53611 331 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 CCDC96Q2M329 555 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 IQSEC1Q6DN90 963 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 KIAA1211Q6ZU35 1233 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 SLC28A3Q9HAS3 691 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 CYP39A1Q9NYL5 469 aa30.71■■■□□ 2.51
PVT1-219ENST00000523427 YBX2Q9Y2T7 364 aaKnown RBP30.71■■■□□ 2.51
PVT1-219ENST00000523427 RANBP6O60518 1105 aaKnown RBP30.7■■■□□ 2.51
PVT1-219ENST00000523427 ZMYM1Q5SVZ6 1142 aa30.7■■■□□ 2.51
PVT1-219ENST00000523427 TAPT1Q6NXT6 567 aa30.7■■■□□ 2.51
PVT1-219ENST00000523427 NOC4LQ9BVI4 516 aaKnown RBP30.7■■■□□ 2.51
PVT1-219ENST00000523427 IL17RBQ9NRM6 502 aa30.7■■■□□ 2.51
PVT1-219ENST00000523427 AKNAD1Q5T1N1 836 aa30.69■■■□□ 2.5
PVT1-219ENST00000523427 PI4K2BQ8TCG2 481 aa30.69■■■□□ 2.5
PVT1-219ENST00000523427 SCLYQ96I15 445 aa30.69■■■□□ 2.5
PVT1-219ENST00000523427 THEGQ9P2T0 379 aa30.69■■■□□ 2.5
PVT1-219ENST00000523427 TTC41PQ6P2S7 1318 aa30.69■■■□□ 2.5
PVT1-219ENST00000523427 ZBBXA8MT70 800 aa30.68■■■□□ 2.5
PVT1-219ENST00000523427 SLC16A2P36021 539 aa30.68■■■□□ 2.5
PVT1-219ENST00000523427 WNT8AQ9H1J5 351 aa30.68■■■□□ 2.5
PVT1-219ENST00000523427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.68■■■□□ 2.5
PVT1-219ENST00000523427 PLA2G6O60733 806 aa30.67■■■□□ 2.5
PVT1-219ENST00000523427 PPP4R3BQ5MIZ7 849 aa30.67■■■□□ 2.5
PVT1-219ENST00000523427 TTBK2Q6IQ55 1244 aa30.67■■■□□ 2.5
PVT1-219ENST00000523427 MICALL1Q8N3F8 863 aa30.67■■■□□ 2.5
PVT1-219ENST00000523427 TOMM22Q9NS69 142 aa30.67■■■□□ 2.5
PVT1-219ENST00000523427 MYOGP15173 224 aa30.66■■■□□ 2.5
PVT1-219ENST00000523427 BAATQ14032 418 aaPredicted RBP30.66■■■□□ 2.5
PVT1-219ENST00000523427 ATXN2LQ8WWM7 1075 aaKnown RBP30.66■■■□□ 2.5
PVT1-219ENST00000523427 VTA1Q9NP79 307 aa30.66■■■□□ 2.5
PVT1-219ENST00000523427 SLC4A7Q9Y6M7 1214 aa30.66■■■□□ 2.5
PVT1-219ENST00000523427 CHD9Q3L8U1 2897 aa30.65■■■□□ 2.5
PVT1-219ENST00000523427 RPUSD2Q8IZ73 545 aaKnown RBP30.65■■■□□ 2.5
PVT1-219ENST00000523427 ASB2Q96Q27 587 aa30.65■■■□□ 2.5
PVT1-219ENST00000523427 FOXP2O15409 715 aa30.64■■■□□ 2.5
PVT1-219ENST00000523427 MYL3P08590 195 aa30.64■■■□□ 2.5
PVT1-219ENST00000523427 CYP2C9P11712 490 aa30.64■■■□□ 2.5
PVT1-219ENST00000523427 RRP12Q5JTH9 1297 aaKnown RBP30.64■■■□□ 2.5
PVT1-219ENST00000523427 VPS53Q5VIR6 699 aa30.64■■■□□ 2.5
PVT1-219ENST00000523427 PPP1R13LQ8WUF5 828 aa30.64■■■□□ 2.5
PVT1-219ENST00000523427 GPCPD1Q9NPB8 672 aa30.64■■■□□ 2.5
PVT1-219ENST00000523427 TRMT13Q9NUP7 481 aaKnown RBP30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms