RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PAPD7Q5XG87 772 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 VPS36Q86VN1 386 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 FMNL3Q8IVF7 1028 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 ZCRB1Q8TBF4 217 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 ZIM3Q96PE6 472 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 VAT1LQ9HCJ6 419 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 KCNK3O14649 394 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 LONP1P36776 959 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 HERVK_113P62684 666 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 IFI16Q16666 785 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 TMEM266Q2M3C6 531 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 RASGRP4Q8TDF6 673 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 ZNF473Q8WTR7 871 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 P2RX5Q93086 422 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 ZSCAN10Q96SZ4 725 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 EHD2Q9NZN4 543 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 PDE8BO95263 885 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 CLTAP09496 248 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 SLC8A1P32418 973 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 AMPD2Q01433 879 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 RPS6KA1Q15418 735 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 GIGYF2Q6Y7W6 1299 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 DYMQ7RTS9 669 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 CABP7Q86V35 215 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 LCORLQ8N3X6 602 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 CCT8L2Q96SF2 557 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 SLC39A2Q9NP94 309 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 STX8Q9UNK0 236 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 PLAAQ9Y263 795 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 CACNA1FO60840 1977 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 A0A1W2PQC6 194 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 TRAF5O00463 557 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 SCG2P13521 617 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 PPP1R2P41236 205 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 TCERG1LQ5VWI1 586 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 HDAC7Q8WUI4 952 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 EPN3Q9H201 632 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 ACTR5Q9H9F9 607 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-212ENST00000523387 SLC24A3Q9HC58 644 aa9.99□□□□□ -0.81
CSMD1-212ENST00000523387 C3P01024 1663 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 FAM208AQ9UK61 1670 aaKnown RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 A0A087X0B3 334 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 HMGB1P1B2RPK0 211 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 KIF1CO43896 1103 aaKnown RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 ELF1P32519 619 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 GCKP35557 465 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 NAA35Q5VZE5 725 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 GPKOWQ92917 476 aaPredicted RBP eCLIP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 DHTKD1Q96HY7 919 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 RAB34Q9BZG1 259 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 OVOS2A0A0G2JMS6 1433 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 ADAMTS13Q76LX8 1427 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 SLIT1O75093 1534 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 PEAK1Q9H792 1746 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 RNF225M0QZC1 329 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 BACH1O14867 736 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 PCCAP05165 728 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 INF2Q27J81 1249 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 CAVIN4Q5BKX8 364 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 SFMBT2Q5VUG0 894 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 HIBCHQ6NVY1 386 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 BLIDQ8IZY5 108 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 TCP11Q8WWU5 503 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 NSRP1Q9H0G5 558 aaKnown RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 SEC63Q9UGP8 760 aaKnown RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 SWAP70Q9UH65 585 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 GOLGA6L10A0A0M3HER8 536 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 NBPF26B4DH59 902 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 CLSTN1O94985 981 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 CCNE1P24864 410 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 KLK7P49862 253 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 NAPAP54920 295 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 KLHL30Q0D2K2 578 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 FAM47AQ5JRC9 791 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 SWT1Q5T5J6 900 aaKnown RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
CSMD1-212ENST00000523387 SV2BQ7L1I2 683 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
CSMD1-212ENST00000523387 PDE2AO00408 941 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-212ENST00000523387 PRPF3O43395 683 aaKnown RBP9.97□□□□□ -0.81
CSMD1-212ENST00000523387 CPP00450 1065 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 PEX19P40855 299 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 KIAA0753Q2KHM9 967 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 MMGT1Q8N4V1 131 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-212ENST00000523387 MICAL1Q8TDZ2 1067 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 WHAMMQ8TF30 809 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 IQCDQ96DY2 449 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 MS4A14Q96JA4 679 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 ATP6V1G3Q96LB4 118 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 DISC1Q9NRI5 854 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 XDHP47989 1333 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 MON2Q7Z3U7 1717 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 HGSO14964 777 aaPredicted RBP9.97□□□□□ -0.81
CSMD1-212ENST00000523387 TRAPPC10P48553 1259 aa9.97□□□□□ -0.81
CSMD1-212ENST00000523387 CARSP49589 748 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms