RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 DGKHQ86XP1 1220 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 ZNF444Q8N0Y2 327 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-211ENST00000523062 CRACR2BQ8N4Y2 399 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-211ENST00000523062 CTCFLQ8NI51 663 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-211ENST00000523062 BICD2Q8TD16 824 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 C7orf43Q8WVR3 580 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 TSC1Q92574 1164 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 ANKS1AQ92625 1134 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 TEKT1Q969V4 418 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 DYNLL2Q96FJ2 89 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 AIFM3Q96NN9 605 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 USP28Q96RU2 1077 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 TSPY26PQ9H489 355 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 KAT14Q9H8E8 782 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 DBNDD1Q9H9R9 158 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 DDX19AQ9NUU7 478 aaKnown RBP7.92□□□□□ -1.14
CSMD1-211ENST00000523062 POLR3EQ9NVU0 708 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 RTEL1Q9NZ71 1219 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 RCOR1Q9UKL0 485 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 ECM29Q5VYK3 1845 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 USP17L3A6NCW0 530 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 USP17L4A6NCW7 530 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 KIF28PB7ZC32 967 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 F8W031 263 aaPredicted RBP7.91□□□□□ -1.14
CSMD1-211ENST00000523062 GPR25O00155 361 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 PRPF3O43395 683 aaKnown RBP7.91□□□□□ -1.14
CSMD1-211ENST00000523062 XBP1P17861 261 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 RASA1P20936 1047 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 CRKP46108 304 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 CDK8P49336 464 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 SNRPNP63162 240 aaKnown RBP7.91□□□□□ -1.14
CSMD1-211ENST00000523062 HDLBPQ00341 1268 aaKnown RBP7.91□□□□□ -1.14
CSMD1-211ENST00000523062 TROAPQ12815 778 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 AOC3Q16853 763 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 TPRNQ4KMQ1 711 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 INTS6LQ5JSJ4 861 aaKnown RBP7.91□□□□□ -1.14
CSMD1-211ENST00000523062 DACT2Q5SW24 774 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 CCDC73Q6ZRK6 1079 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 USP17L1Q7RTZ2 530 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 CCDC125Q86Z20 511 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 RTKN2Q8IZC4 609 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 TTLL6Q8N841 843 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
CSMD1-211ENST00000523062 KCNG4Q8TDN1 519 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 PGBD1Q96JS3 809 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 TRERF1Q96PN7 1200 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 MAP3K14Q99558 947 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 MRIQ9BWK5 157 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 NUP62CLQ9H1M0 184 aa7.91□□□□□ -1.14
CSMD1-211ENST00000523062 CDK5RAP2Q96SN8 1893 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 FOCADQ5VW36 1801 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 PLIN4Q96Q06 1357 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 MYO3BQ8WXR4 1341 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 PPIP5K2O43314 1243 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 NMT2O60551 498 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 WDHD1O75717 1129 aaPredicted RBP7.9□□□□□ -1.14
CSMD1-211ENST00000523062 PLEKHA8P1O95397 391 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 MMP1P03956 469 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 HLA-DOAP06340 250 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 LIG1P18858 919 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 U2AF2P26368 475 aaKnown RBP eCLIP7.9□□□□□ -1.14
CSMD1-211ENST00000523062 ME1P48163 572 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
CSMD1-211ENST00000523062 GNAQP50148 359 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 SCNN1DP51172 638 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 PLCD1P51178 756 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 CEBPZQ03701 1054 aaKnown RBP7.9□□□□□ -1.14
CSMD1-211ENST00000523062 STK38Q15208 465 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 DBN1Q16643 649 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 QPCTQ16769 361 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 SOGA3Q5TF21 947 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 ANO1Q5XXA6 986 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 RCSD1Q6JBY9 416 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 JMYQ8N9B5 988 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 LINC00301Q8NCQ3 95 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 SLC44A5Q8NCS7 719 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 PNMA1Q8ND90 353 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 ANP32BQ92688 251 aaKnown RBP7.9□□□□□ -1.14
CSMD1-211ENST00000523062 ZDHHC15Q96MV8 337 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 PSMD1Q99460 953 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 MXD3Q9BW11 206 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 FTOQ9C0B1 505 aaKnown RBP eCLIP7.9□□□□□ -1.14
CSMD1-211ENST00000523062 FOXP1Q9H334 677 aaPredicted RBP7.9□□□□□ -1.14
CSMD1-211ENST00000523062 CLSTN2Q9H4D0 955 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 BRMS1Q9HCU9 246 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 GJB4Q9NTQ9 266 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 USP40Q9NVE5 1235 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 SWAP70Q9UH65 585 aa7.9□□□□□ -1.14
CSMD1-211ENST00000523062 A0A1W2PQ27 194 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 A0A1W2PQ64 194 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 A0A1W2PQD8 194 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 SPTLC2O15270 562 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 C21orf2O43822 256 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 LILRB3O75022 631 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 DPEP1P16444 411 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 MX2P20592 715 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 COL8A1P27658 744 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 GUCY1A2P33402 732 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 PLCB2Q00722 1185 aa7.89□□□□□ -1.15
CSMD1-211ENST00000523062 PICALMQ13492 652 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms