RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 PLA2G6O60733 806 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 LETM1O95202 739 aaPredicted RBP17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 VCAM1P19320 739 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 CLK2P49760 499 aaKnown RBP17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 BACE1P56817 501 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 ATP2C1P98194 919 aaPredicted RBP17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 VGLL4Q14135 290 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 NOL9Q5SY16 702 aaKnown RBP17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 RESP18Q5W5W9 173 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP17L6PQ6QN14 398 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 CKAP2LQ8IYA6 745 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 SCN4AP35499 1836 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 USP14P54578 494 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 MAP3K9P80192 1104 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 NEK8Q86SG6 692 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 RPAP3Q9H6T3 665 aaPredicted RBP17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 PHIPQ8WWQ0 1821 aa17.6■□□□□ 0.41
CTNNA1-236ENST00000522792 PPP1R12BO60237 982 aaPredicted RBP17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 CCNT1O60563 726 aaKnown RBP17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 HMGCS2P54868 508 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 SLF1Q9BQI6 1058 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 SNCAIPQ9Y6H5 919 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 WDR90Q96KV7 1748 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 VWA3AA6NCI4 1184 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 POTEIP0CG38 1075 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 POTEJP0CG39 1038 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 MOB2Q70IA6 237 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 HPSEQ9Y251 543 aa17.59■□□□□ 0.41
CTNNA1-236ENST00000522792 OTOFQ9HC10 1997 aa17.58■□□□□ 0.41
CTNNA1-236ENST00000522792 FLOT1O75955 427 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 ZNF202O95125 648 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 SYKP43405 635 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 TTLL12Q14166 644 aaPredicted RBP17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 C4orf32Q8N8J7 132 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 FERMT2Q96AC1 680 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 TMEM60Q9H2L4 133 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 TSPY26PQ9H489 355 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 PAPPA2Q9BXP8 1791 aa17.58■□□□□ 0.4
CTNNA1-236ENST00000522792 OPLAHO14841 1288 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 NF2P35240 595 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 IL17AQ16552 155 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 USP49Q70CQ1 688 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 PNMA8AQ86V59 439 aaPredicted RBP17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 PRPF38AQ8NAV1 312 aaKnown RBP17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 FAM13BQ9NYF5 915 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 CSADQ9Y600 493 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 MEIS2O14770 477 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 IREB2P48200 963 aaKnown RBP17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 GLT8D2Q9H1C3 349 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 GRPEL1Q9HAV7 217 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 KCNH3Q9ULD8 1083 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
CTNNA1-236ENST00000522792 FAM237AA0A1B0GTK4 181 aa17.56■□□□□ 0.4
CTNNA1-236ENST00000522792 SOCS7O14512 581 aa17.56■□□□□ 0.4
CTNNA1-236ENST00000522792 HOXA13P31271 388 aaPredicted RBP17.56■□□□□ 0.4
CTNNA1-236ENST00000522792 P2RX7Q99572 595 aaKnown RBP17.56■□□□□ 0.4
CTNNA1-236ENST00000522792 RBSNQ9H1K0 784 aa17.56■□□□□ 0.4
CTNNA1-236ENST00000522792 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
CTNNA1-236ENST00000522792 EDIL3O43854 480 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 NEMFO60524 1076 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 TDP2O95551 362 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 EPSTI1Q96J88 318 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 CLMNQ96JQ2 1002 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 AGBL1Q96MI9 1066 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 SDF4Q9BRK5 362 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 ANO3Q9BYT9 981 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 PANK2Q9BZ23 570 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 RBM43Q6ZSC3 357 aaKnown RBP17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 CPXCR1Q8N123 301 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 SYMPKQ92797 1274 aaKnown RBP17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 C12orf42Q96LP6 360 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 FUCA2Q9BTY2 467 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 TMOD4Q9NZQ9 345 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 CCPG1Q9ULG6 757 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 PPP1R9AQ9ULJ8 1098 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 SMCHD1A6NHR9 2005 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 ZNF536O15090 1300 aa17.55■□□□□ 0.4
CTNNA1-236ENST00000522792 TRAF1Q13077 416 aa17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 ARL6IP4Q66PJ3 421 aaKnown RBP17.54■□□□□ 0.4
CTNNA1-236ENST00000522792 PDILTQ8N807 584 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms