RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 TMEM199Q8N511 208 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 TRERF1Q96PN7 1200 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 PRDM12Q9H4Q4 367 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 IL17RBQ9NRM6 502 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 TRANK1O15050 2925 aa18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 SLC1A4P43007 532 aa18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 PDE4BQ07343 736 aa18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 ADGRE1Q14246 886 aa18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 ZMYM1Q5SVZ6 1142 aa18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 CCDC174Q6PII3 467 aa18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 NOL8Q76FK4 1167 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 TLK2Q86UE8 772 aa18.15■□□□□ 0.5
TRAPPC9-213ENST00000522504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■■■ 37.3
TRAPPC9-213ENST00000522504 FDX1P10109 184 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 ALAS1P13196 640 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 CTDSPL2Q05D32 466 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 IKQ13123 557 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 FSCN1Q16658 493 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 TAPT1Q6NXT6 567 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 CHURC1Q8WUH1 139 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 VWCEQ96DN2 955 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 NACAP1Q9BZK3 213 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 NAPBQ9H115 298 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 TRPV6Q9H1D0 765 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 CYP39A1Q9NYL5 469 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 PRR12Q9ULL5 1215 aa18.14■□□□□ 0.49
TRAPPC9-213ENST00000522504 TLR3O15455 904 aaKnown RBP18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 DYNC1LI2O43237 492 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 PLA2G6O60733 806 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 PSMC6P62333 389 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 ITGA7Q13683 1181 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 TJAP1Q5JTD0 557 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 PSRC1Q6PGN9 363 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 EEPD1Q7L9B9 569 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 FAM160B2Q86V87 743 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 FBXO16Q8IX29 292 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 PPM1EQ8WY54 764 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 HERVK_113Q902F9 699 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 HIPK3Q9H422 1215 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 STX8Q9UNK0 236 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 YBX2Q9Y2T7 364 aaKnown RBP18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 PCDHB15Q9Y5E8 787 aa18.13■□□□□ 0.49
TRAPPC9-213ENST00000522504 BDP1A6H8Y1 2624 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 ASB14A6NK59 587 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 CCL23P55773 120 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 TKFCQ3LXA3 575 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 RCSD1Q6JBY9 416 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 SYMPKQ92797 1274 aaKnown RBP18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 FSD1Q9BTV5 496 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 WNT8AQ9H1J5 351 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 TTC41PQ6P2S7 1318 aa18.12■□□□□ 0.49
TRAPPC9-213ENST00000522504 B4GALT4O60513 344 aa18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 SLC3A2P08195 630 aaKnown RBP18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 TTBK2Q6IQ55 1244 aa18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 OTOP2Q7RTS6 562 aa18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 NOC4LQ9BVI4 516 aaKnown RBP18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 NKX2-4Q9H2Z4 354 aa18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 MTMR7Q9Y216 660 aa18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 LRRC37A2A6NM11 1700 aa18.11■□□□□ 0.49
TRAPPC9-213ENST00000522504 MYO9BQ13459 2157 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 CABYRO75952 493 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 FGBP02675 491 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 NOVP48745 357 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 LRRFIP1Q32MZ4 808 aaKnown RBP18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 IQSEC1Q6DN90 963 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 NSMFQ6X4W1 530 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 MORC4Q8TE76 937 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 GAS2L1Q99501 681 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 AP5M1Q9H0R1 490 aa18.1■□□□□ 0.49
TRAPPC9-213ENST00000522504 TSPY2A6NKD2 308 aa18.09■□□□□ 0.49
TRAPPC9-213ENST00000522504 SLC16A2P36021 539 aa18.09■□□□□ 0.49
TRAPPC9-213ENST00000522504 RABGGTBP53611 331 aa18.09■□□□□ 0.49
TRAPPC9-213ENST00000522504 CCDC85BQ15834 202 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-213ENST00000522504 AKNAD1Q5T1N1 836 aa18.09■□□□□ 0.49
TRAPPC9-213ENST00000522504 CCPG1Q9ULG6 757 aa18.09■□□□□ 0.49
TRAPPC9-213ENST00000522504 LCTP09848 1927 aa18.08■□□□□ 0.49
TRAPPC9-213ENST00000522504 SALL3Q9BXA9 1300 aa18.08■□□□□ 0.49
TRAPPC9-213ENST00000522504 ERC2O15083 957 aa18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 MYOGP15173 224 aa18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 BAATQ14032 418 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 KIAA1211Q6ZU35 1233 aa18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 SCLYQ96I15 445 aa18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 RANBP17Q9H2T7 1088 aaKnown RBP18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 MSRAQ9UJ68 235 aa18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 Q9Y3F1 56 aa18.08■□□□□ 0.48
TRAPPC9-213ENST00000522504 NFIBO00712 420 aa18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 RANBP6O60518 1105 aaKnown RBP18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 ICAM1P05362 532 aa18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 MX1P20591 662 aa18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 RAB30Q15771 203 aa18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 ALDH8A1Q9H2A2 487 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 VTA1Q9NP79 307 aa18.07■□□□□ 0.48
TRAPPC9-213ENST00000522504 TRMT13Q9NUP7 481 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms